miRNEST 2.0, an integrative microRNA resource :: BLAST
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 77.8 bits (39), Expect = 1e-15
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacacgtagagacccatctgttt--atgatcggcta-ct 65
||||||||||||||||||||||||||||||||||| || ||| ||| ||||| |
Sbjct: 9 tgtgcctggctccctgtatgccacacgtagagaccactccctttcccggattggctattt 68
Query: 66 gcgggtggcgtgcgaggagccaagcatacc 95
||||||||||||||||||||||||||||||
Sbjct: 69 gcgggtggcgtgcgaggagccaagcatacc 98
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 65.9 bits (33), Expect = 5e-12
Identities = 74/87 (85%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacgtagagacccatct---gtttatgatcggctactgc 67
||||||||||||||||||||||| | | ||||| |||| |||| ||| |||| |||
Sbjct: 11 tgcctggctccctgtatgccacaagcaaagaccaatcttttgttttagattggctgttgc 70
Query: 68 gggtggcgtgcgaggagccaagcatac 94
||||||||||||||||||||||||||
Sbjct: 71 cggtggcgtgcgaggagccaagcatac 97
>41926_osa-MIR160d:mirbase
Length = 142
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 61 ctactgcgggtggcgtgcgaggagccaagcat 92
||||||||| ||||||||||||||||||||||
Sbjct: 107 ctactgcggatggcgtgcgaggagccaagcat 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 gctgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||||
Sbjct: 27 gctgtgcctggctccctgtatgccacac 54
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagcat 92
||||||||||| |||||||||||||
Sbjct: 91 gggtggcgtgcaaggagccaagcat 115
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 ggctactgcgggtggcgtgcgaggagccaagcatac 94
|||| |||| ||||||||||||||||||||||||||
Sbjct: 63 ggctgctgccggtggcgtgcgaggagccaagcatac 98
>40340_rco-MIR160b:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 ggctactgcgggtggcgtgcgaggagccaagcatac 94
||||| ||| ||||||||||||||||||||||||||
Sbjct: 57 ggctattgccggtggcgtgcgaggagccaagcatac 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccaca 33
|||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccaca 28
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 ctactgcgggtggcgtgcgaggagccaagca 91
||||||||| |||||||||||||||||||||
Sbjct: 70 ctactgcggatggcgtgcgaggagccaagca 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42702_zma-MIR160b:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccacac 44
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagcat 92
||||||||||| |||||||||||||
Sbjct: 78 gggtggcgtgcaaggagccaagcat 102
>41923_osa-MIR160a:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccacac 27
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagcat 92
||||||||||| |||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagcat 86
>42701_zma-MIR160a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccacac 34
|||||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccacac 33
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccacac 34
|||||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccacac 54
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagcat 92
||||||||||| |||||||||||||
Sbjct: 89 gggtggcgtgcaaggagccaagcat 113
>39374_pab-MIR160a:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccaca 33
|||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccaca 36
>42707_zma-MIR160g:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccacac 25
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagcat 92
||||||||||| |||||||||||||
Sbjct: 60 gggtggcgtgcaaggagccaagcat 84
>42703_zma-MIR160c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 7 tgtgcctggctccctgtatgccac 30
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 ctactgcgggtggcgtgcgaggagccaagcat 92
|||| |||| ||||||||||||||||||||||
Sbjct: 81 ctaccgcggatggcgtgcgaggagccaagcat 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagca 91
||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>41869_far-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacac 34
||||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccacac 76
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 ctactgcgggtggcgtgcgaggagccaagcat 92
|||| |||| ||||||||||||||||||||||
Sbjct: 112 ctaccgcggatggcgtgcgaggagccaagcat 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccac 53
>40020_ath-MIR160b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccaca 33
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>39808_aly-MIR160b:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccaca 33
||||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43
>41924_osa-MIR160b:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccac 32
|||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccac 51
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gggtggcgtgcgaggagccaagcat 92
||||||||||| |||||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagcat 112
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>42705_zma-MIR160e:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 64 ctgcgggtggcgtgcgaggagccaagcat 92
|||||| |||||||||||| |||||||||
Sbjct: 59 ctgcggctggcgtgcgaggtgccaagcat 87
>42704_zma-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 actgcgggtggcgtgcgaggagccaagcat 92
||||||| ||||||||| ||||||||||||
Sbjct: 95 actgcggatggcgtgcgtggagccaagcat 124
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 64 ctgcgggtggcgtgcgaggagccaagca 91
|||||| |||||||||||| ||||||||
Sbjct: 68 ctgcggctggcgtgcgaggtgccaagca 95
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 gcctggctccctgtatgccac 32
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
