miRNEST 2.0, an integrative microRNA resource :: BLAST
>sp|Q8N976|YG039_HUMAN Putative uncharacterized protein FLJ38264
OS=Homo sapiens PE=5 SV=1
Length = 141
Score = 31.6 bits (70), Expect(2) = 4e-04
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 85 DPPASASQSAGITGVSHHS 141
DPP AS+SAGITG+SH +
Sbjct: 61 DPPTLASRSAGITGMSHRA 79
Score = 31.2 bits (69), Expect(2) = 4e-04
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3
Query: 3 HMWLIFVFLVEMEFHHADQAG 65
H LIFVFLVE FHH AG
Sbjct: 33 HTRLIFVFLVETGFHHVGHAG 53
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LG23|PPR82_ARATH Pentatricopeptide repeat_field-containing protein
At1g55890, mitochondrial OS=Arabidopsis thaliana
GN=At1g55890 PE=1 SV=1
Length = 398
Score = 62.8 bits (151), Expect = 7e-10
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +1
Query: 1 IIEHQKHCPDIRNEYFVARLILLYGKAKMYDNARKLFDEMPQLKCPRFVFSFNA 162
I+E QK D+ E F AR+I LYGKA M++NA+K+F+EMP C R V SFNA
Sbjct: 96 ILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNA 149
>sp|Q9LK58|PP225_ARATH Pentatricopeptide repeat_field-containing protein
At3g13150 OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1
Length = 551
Score = 62.8 bits (151), Expect = 7e-10
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 1 IIEHQKHCPDIRNEYFVARLILLYGKAKMYDNARKLFDEMPQLKCPRFVFSFNA 162
++++QK DI++E FV R++LLYG + M ++A KLFDEMP+L C R V SFNA
Sbjct: 109 VLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNA 162
>sp|Q9LK57|PP226_ARATH Pentatricopeptide repeat_field-containing protein
At3g13160, mitochondrial OS=Arabidopsis thaliana
GN=At3g13160 PE=1 SV=1
Length = 394
Score = 62.0 bits (149), Expect = 1e-09
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 1 IIEHQKHCPDIRNEYFVARLILLYGKAKMYDNARKLFDEMPQLKCPRFVFSFNA 162
I+E Q P++ E FVAR+I LYG+ M++NA+K+FDEMP+ C R SFNA
Sbjct: 93 ILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNA 146
>sp|Q9ZU67|PP162_ARATH Pentatricopeptide repeat_field-containing protein
At2g18520, mitochondrial OS=Arabidopsis thaliana
GN=At2g18520 PE=2 SV=1
Length = 418
Score = 56.6 bits (135), Expect = 5e-08
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +1
Query: 1 IIEHQKHCPDIRNEYFVARLILLYGKAKMYDNARKLFDEMPQLKCPRFVFSFNA 162
+IE K+ P I+ E F++ LI YG+A M+D+A K+F+EM +L PR V SFNA
Sbjct: 89 LIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNA 142
>sp|Q8GW57|PP134_ARATH Pentatricopeptide repeat_field-containing protein
At1g80150, mitochondrial OS=Arabidopsis thaliana
GN=At1g80150 PE=2 SV=2
Length = 397
Score = 49.3 bits (116), Expect = 8e-06
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1
Query: 1 IIEHQKHCPDIRNEYFVARLILLYGKAKMYDNARKLFDEMPQLKCPRFVFSFNA 162
++EHQK P R E F+ R+I+LYGKA M A F M C R V SFNA
Sbjct: 93 LLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNA 146
>sp|Q9M065|PP352_ARATH Pentatricopeptide repeat_field-containing protein
At4g36680, mitochondrial OS=Arabidopsis thaliana
GN=At4g36680 PE=1 SV=1
Length = 412
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 1 IIEHQKHCPDIRNEYFVARLILLYGKAKMYDNARKLFDEMPQLKCPRFVFSFNA 162
+IE K+ P I+ E F + LI YG+A M+++A + F++M Q PR SFNA
Sbjct: 89 LIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNA 142
