miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 77.8 bits (39), Expect = 5e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactga 45
Score = 58.0 bits (29), Expect = 5e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcggtgaccgcggtga 353
||||||||||||||||||||||||| ||||| |||||
Sbjct: 142 tcccgccttgcatcaactgaatcggagaccgaggtga 178
>41210_ccl-MIR168:mirbase
Length = 176
Score = 77.8 bits (39), Expect = 5e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaactga 44
Score = 56.0 bits (28), Expect = 2e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcggtgaccgcggtg 352
||||||||||||||||||||||||| ||||| ||||
Sbjct: 141 tcccgccttgcatcaactgaatcggagaccgaggtg 176
>41101_tcc-MIR168:mirbase
Length = 167
Score = 77.8 bits (39), Expect = 5e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactga 45
Score = 65.9 bits (33), Expect = 2e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcggtgaccgcggtga 353
||||||||||||||||||||||||| |||||||||||
Sbjct: 126 tcccgccttgcatcaactgaatcggagaccgcggtga 162
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 69.9 bits (35), Expect = 1e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactga 35
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcgg 133
>40448_gma-MIR168:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 5e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcggtgaccgcggtgaa 354
||||||||||||||||||||||||| | ||||||||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>41596_vvi-MIR168:mirbase
Length = 132
Score = 65.9 bits (33), Expect = 2e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgact 51
|||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccgact 37
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcgg 125
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 61.9 bits (31), Expect = 3e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactga 49
||||||| |||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactga 35
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcgg 157
>40044_ath-MIR168b:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 3e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||| |||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactga 43
>39833_aly-MIR168b:mirbase
Length = 176
Score = 61.9 bits (31), Expect = 3e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||| |||||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaactga 67
>40355_rco-MIR168:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 20 ctaattcgcttggtgcaggtcgggaactga 49
||||||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactga 30
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcg 340
||||||||||||||||||||||||
Sbjct: 105 tcccgccttgcatcaactgaatcg 128
>40271_bna-MIR168:mirbase
Length = 133
Score = 54.0 bits (27), Expect = 8e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||| |||| | |||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactga 42
>40043_ath-MIR168a:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgg 126
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 108 tcccgccttgcatcaactgaatcgg 132
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>42742_zma-MIR168b:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||| ||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcgg 90
