miRNEST 2.0, an integrative microRNA resource :: BLAST
>48500_ghr-miR390c:pmrd
Length = 114
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatggatga 55
||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatggatga 39
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 102 atagcgctatccatcctgagtttcat 127
||||||||||||||||||||||||||
Sbjct: 84 atagcgctatccatcctgagtttcat 109
>48499_ghr-miR390b:pmrd
Length = 132
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatggatga 55
||||||||| |||||||||||||||||||||||||||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgccatggatga 46
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 102 atagcgctatccatcctgagtttcatagcttcttcatgct 141
|||||||||||||||||||||||||| | |||||| ||||
Sbjct: 91 atagcgctatccatcctgagtttcatcggttcttcttgct 130
>48498_ghr-miR390a:pmrd
Length = 124
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatggatga 55
||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccatggatga 43
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 102 atagcgctatccatcctgagtttcatagcttcttc 136
|||||||||||||||||||||||||| | ||||||
Sbjct: 88 atagcgctatccatcctgagtttcatcggttcttc 122
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatg 50
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatg 41
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagtttcat 127
|||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttcat 91
>46995_ath-miR390a:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatg 50
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatg 41
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagtttcat 127
|||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttcat 91
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 14 gggagaatctgtaaagctcaggagggatagcgccatg 50
|||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gggagaatctgttaagctcaggagggatagcgccatg 37
>48371_bna-miR390b:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 8e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccat 49
|||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
>54848_vvi-miR390:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatg 50
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>51716_ptc-miR390a:pmrd
Length = 119
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgccatg 50
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>48372_bna-miR390c:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 22 ctgtaaagctcaggagggatagcgccatg 50
|||||||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgccatg 46
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagtttcatagcttcttcatgct 141
||||||||||||||||||| ||| |||||||| ||||
Sbjct: 85 gcgctatccatcctgagttccatggcttcttcttgct 121
>48370_bna-miR390a:pmrd
Length = 144
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 22 ctgtaaagctcaggagggatagcgccatg 50
|||||||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccatg 56
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagtttcatagcttcttcatgct 141
||||||||||||||||||| || |||||||| ||||
Sbjct: 95 gcgctatccatcctgagttctatggcttcttcttgct 131
>48575_gma-miR390b:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagc 44
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>46996_ath-miR390b:pmrd
Length = 120
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagtttcatagcttcttc 136
||||||||||||||||||| ||||||||||||
Sbjct: 87 gcgctatccatcctgagttccatagcttcttc 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 25 taaagctcaggagggatagcgccatgg 51
|||||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgccatgg 39
>51719_ptc-miR390d:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgcc 47
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagttt 124
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>51718_ptc-miR390c:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 20 atctgtaaagctcaggagggatagcgccatg 50
|||||| ||||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatg 34
>51717_ptc-miR390b:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 17 agaatctgtaaagctcaggagggatagcgcc 47
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagtttcatagctt 132
||||||||||||||||||||||| ||||
Sbjct: 79 gcgctatccatcctgagtttcattgctt 106
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccatg 50
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagttt 124
||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71
>51391_ppt-miR390a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccat 49
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>48729_mtr-miR390:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgccat 49
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagttt 124
||||||||||||||||||||
Sbjct: 71 gcgctatccatcctgagttt 90
>55055_zma-miR390:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>53138_ptc-miRf11316-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 4 aagctcaggagggatagcgcc 24
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gcgctatccatcctgagttt 124
||||||||||||||||||||
Sbjct: 72 gcgctatccatcctgagttt 91
>51392_ppt-miR390b:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>48916_osa-miR390:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aagctcaggagggatagcgcc 47
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>51394_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 agctcaggagggatagcgcc 47
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>51393_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 agctcaggagggatagcgcc 47
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
