miRNEST 2.0, an integrative microRNA resource :: BLAST
>54540_sly-miR159:pmrd
Length = 177
Score = 103 bits (52), Expect = 5e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 15 tggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatgg 74
|||||||||||||||||||||| | ||||||||||| | ||| ||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 75 attcctcagtcctatctatt 94
||||||||| ||||||||||
Sbjct: 61 attcctcagccctatctatt 80
>51602_ptc-miR159a:pmrd
Length = 183
Score = 77.8 bits (39), Expect = 3e-15
Identities = 140/171 (81%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 12 gagtggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgaccta 71
||||||||||||||||||||||| ||||| ||| | || ||||||||||||| | |||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 72 tggattcctcagtcctatctattatttgataggataggtaagtgggtagcatatgtcagg 131
|||| ||| ||||||||||||| | ||| ||||||||| | || | |||||| |||||
Sbjct: 68 tgga-tccacagtcctatctatcaactga-aggataggtttgcggcttgcatatctcagg 125
Query: 132 agctacattaccctaagttggatcgcttattggatcgaagggagctctaaa 182
|||| ||| || | ||| |||| ||| |||||| |||||||||||||||
Sbjct: 126 agctttattgcctaatgttagatccctttttggattgaagggagctctaaa 176
>54777_vvi-miR159c:pmrd
Length = 190
Score = 69.9 bits (35), Expect = 7e-13
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 12 gagtggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgaccta 71
||||||||||||||||||||||| ||||| ||| || || ||||| |||||||||| ||
Sbjct: 6 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
Query: 72 tggattcctcagtcctatc 90
||||| || ||| ||||||
Sbjct: 66 tggatcccacagccctatc 84
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 139/171 (81%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 12 gagtggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgaccta 71
||||||||||||||||||||||| ||||| ||| | || ||||||||||||| | |||
Sbjct: 3 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 62
Query: 72 tggattcctcagtcctatctattatttgataggataggtaagtgggtagcatatgtcagg 131
|||| ||| ||||||||||||| | || ||||||||| | || | |||||| |||||
Sbjct: 63 tgga-tccacagtcctatctatcaaccga-aggataggtttgcggcttgcatatctcagg 120
Query: 132 agctacattaccctaagttggatcgcttattggatcgaagggagctctaaa 182
|||| ||| || | ||| |||| ||| |||||| |||||||||||||||
Sbjct: 121 agctttattgcctaatgttagatccctttttggattgaagggagctctaaa 171
>51604_ptc-miR159c:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 139/171 (81%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 12 gagtggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgaccta 71
||||||||||||||||||||||| ||||| ||| | || ||||||||||||| | |||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 72 tggattcctcagtcctatctattatttgataggataggtaagtgggtagcatatgtcagg 131
|||| ||| ||||||||||||| | || ||||||||| | || | |||||| |||||
Sbjct: 68 tgga-tccacagtcctatctatcaaccga-aggataggtttgcggcttgcatatctcagg 125
Query: 132 agctacattaccctaagttggatcgcttattggatcgaagggagctctaaa 182
|||| ||| || | ||| |||| ||| |||||| |||||||||||||||
Sbjct: 126 agctttattgcctaatgttagatccctttttggattgaagggagctctaaa 176
>48539_gma-miR159a:pmrd
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13 agtggagctccttgaagtccaacagaggatct 44
|||||||||||||||||||||| ||||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatct 50
>54378_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 gtggagctccttgaagtccaacagaggatct 44
||||||||||||||||||||| ||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatct 31
>54377_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 gtggagctccttgaagtccaacagaggatct 44
||||||||||||||||||||| ||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatct 31
>51603_ptc-miR159b:pmrd
Length = 187
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 gagtggagctccttgaagtccaa 34
|||||||||||||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaa 30
>55054_zma-miR319m:pmrd
Length = 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 21 attggatcgaagggagctct 2
>54936_zma-miR159g:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 22 attggatcgaagggagctct 3
>54935_zma-miR159f:pmrd
Length = 181
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 22 attggatcgaagggagctct 3
>54933_zma-miR159d:pmrd
Length = 217
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 41 attggatcgaagggagctct 22
>54932_zma-miR159c:pmrd
Length = 217
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 41 attggatcgaagggagctct 22
>54643_sof-miR319b:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 21 attggatcgaagggagctct 2
>54630_sof-miR159c:pmrd
Length = 238
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
||||||||||||||||||||
Sbjct: 64 attggatcgaagggagctct 45
>54403_sbi-miR159b:pmrd
Length = 253
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 attggatcgaagggagctct 179
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Sbjct: 79 attggatcgaagggagctct 60
