miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 40  aatcttttaagcctaattagtgcatgattagccataagtgctacagtaactcgcatgtgc 99
           |||||||| |||||||||||| |||||||||  ||||||||||||||||| || ||||||
Sbjct: 17  aatcttttgagcctaattagtccatgattagttataagtgctacagtaacccgtatgtgc 76

                 
Query: 100 taatga 105
           ||||||
Sbjct: 77  taatga 82




>51000_osa-miRf11785-akr:pmrd
          Length = 128

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 40  aatcttttaagcctaattagtgcatgattagccataagtgctacagtaac 89
           |||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 109 aatcttttgagcctaattagttcatgattagccataagtgctacagtaac 60




>49455_osa-miRf10240-akr:pmrd
          Length = 128

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 40  aatcttttaagcctaattagtgcatgattagccataagtgctacagtaactcgcatgtgc 99
           |||||||| ||||||||||||  ||||||| |||||||||||||| |||| | |||||||
Sbjct: 20  aatcttttgagcctaattagtatatgattaaccataagtgctacaataacccacatgtgc 79

               
Query: 100 taat 103
           ||||
Sbjct: 80  taat 83




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 61/69 (88%), Gaps = 3/69 (4%)
 Strand = Plus / Minus

                                                                       
Query: 40  aatcttttaagcctaattagtgc---atgattagccataagtgctacagtaactcgcatg 96
           ||||||||||||||||||||| |   | ||||||||||||||||||||||||  | ||||
Sbjct: 108 aatcttttaagcctaattagtactacacgattagccataagtgctacagtaatccacatg 49

                    
Query: 97  tgctaatga 105
           |||||||||
Sbjct: 48  tgctaatga 40




>50516_osa-miRf11301-akr:pmrd
          Length = 139

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                            
Query: 40 aatcttttaagcctaattagtgcatgattagccataagtgctacagtaac 89
          |||||||| ||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 61 aatcttttgagcctaattagtctatgattaaccataagtgctacagtaac 12



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 51  ctcaaaagattcgtctcgcg 70




>49652_osa-miRf10437-akr:pmrd
          Length = 120

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                            
Query: 40 aatcttttaagcctaattagtgcatgattagccataagtgctacagtaac 89
          |||||||| |||||||||||| ||||||||||||||| ||||| ||||||
Sbjct: 16 aatcttttgagcctaattagtccatgattagccataaatgctatagtaac 65




>50155_osa-miRf10940-akr:pmrd
          Length = 96

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                     
Query: 40 aatcttttaagcctaattagtgcatgattagccataagtgcta 82
          |||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 10 aatcttttgagtctaattagtccatgattagccataagtgcta 52




>51304_osa-miRf12089-akr:pmrd
          Length = 120

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 40  aatcttttaagcctaattagtgcatgattagccataagtgctacagtaactcgcatgtgc 99
           |||||||| || ||||||||  ||||||| ||||||||||||| || ||| | |||||||
Sbjct: 105 aatcttttgagtctaattagcccatgatttgccataagtgctatagcaacccacatgtgc 46

                 
Query: 100 taatga 105
           ||||||
Sbjct: 45  taatga 40



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 95  ctcaaaagattcgtctcgcg 114




>49733_osa-miRf10518-akr:pmrd
          Length = 122

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 40  aatcttttaagcctaattagtgcatgattagccataagtgctacagtaactcgcatgtgc 99
           |||||||| ||||||||||||   |||||| |||||| |||||||||||| | ||||| |
Sbjct: 106 aatcttttgagcctaattagtctgtgattaaccataaatgctacagtaacccacatgtac 47

                 
Query: 100 taatga 105
           ||||||
Sbjct: 46  taatga 41




>49015_osa-miR445h:pmrd
          Length = 277

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 164 ctcaaaagattcgtctcgcg 183




>49013_osa-miR445f:pmrd
          Length = 305

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 179 ctcaaaagattcgtctcgcg 198




>49012_osa-miR445e:pmrd
          Length = 265

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 158 ctcaaaagattcgtctcgcg 177




>49009_osa-miR445b:pmrd
          Length = 264

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 157 ctcaaaagattcgtctcgcg 176




>49008_osa-miR445a:pmrd
          Length = 268

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ctcaaaagattcgtctcgcg 138
           ||||||||||||||||||||
Sbjct: 168 ctcaaaagattcgtctcgcg 187