miRNEST 2.0, an integrative microRNA resource :: BLAST
>45828_miR444:micropc
Length = 114
Score = 107 bits (54), Expect = 5e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| |||||||||||||| |||||||||
Sbjct: 110 gcaagcttgagacaacaactgcacaacttgcaagaa 75
Score = 46.1 bits (23), Expect = 2e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 239 gattttcttgcaagttgtgcagttgttgtctcaagcttg 277
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 44 gattttcttgcaagatgtgcagttgctgccacaagcttg 6
>45451_miR444:micropc
Length = 110
Score = 101 bits (51), Expect = 3e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 232 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 282
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| |||||||||||||| |||||||||
Sbjct: 106 gcaagcttgagacaacaactgcacaacttgcaagaa 71
Score = 44.1 bits (22), Expect = 6e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 241 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 282
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45168_miR444:micropc
Length = 110
Score = 101 bits (51), Expect = 3e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 232 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 282
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| |||||||||||||| |||||||||
Sbjct: 106 gcaagcttgagacaacaactgcacaacttgcaagaa 71
Score = 44.1 bits (22), Expect = 6e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 241 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 282
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45238_miR444:micropc
Length = 108
Score = 99.6 bits (50), Expect = 1e-21
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 282
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ccataccgatcattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| |||||||||||||| |||||||||
Sbjct: 104 gcaagcttgagacaacaactgcacaacttgcaagaa 69
>45131_miR444:micropc
Length = 108
Score = 97.6 bits (49), Expect = 5e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 219 ggttttcgggccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgc 278
|||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 45 ggttttcgaaccataccgataattttcttgcangttgtgcagttgttgtctcaagcttgc 104
Query: 279 tgcc 282
||||
Sbjct: 105 tgcc 108
Score = 42.1 bits (21), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| |||||||||||||| ||||||||
Sbjct: 104 gcaagcttgagacaacaactgcacaacntgcaagaa 69
>46210_miR444:micropc
Length = 102
Score = 95.6 bits (48), Expect = 2e-20
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 102
Score = 44.1 bits (22), Expect = 6e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 239 gattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||||| |||||||||| || | |||||||
Sbjct: 38 gattttcttgcaagatgtgcagttgctgccacaagctt 1
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 102 aagcttgagacaacaactgcacaacttgcaagaa 69
>46185_miR444:micropc
Length = 108
Score = 95.6 bits (48), Expect = 2e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 219 ggttttcgggccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgc 278
|||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 45 ggttttcgaaccataccgataattttcttgcaagttgtgcagttgctgtctcaagcttgc 104
Query: 279 tgcc 282
||||
Sbjct: 105 tgcc 108
Score = 40.1 bits (20), Expect = 0.001
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| || ||||||||||| |||||||||
Sbjct: 104 gcaagcttgagacagcaactgcacaacttgcaagaa 69
>44872_miR444:micropc
Length = 106
Score = 93.7 bits (47), Expect = 8e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 219 ggttttcgggccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgc 278
|||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 44 ggttttcgaaccataccgataattttcttgcaagttgtgcagttgctgtctcaagcttgc 103
Query: 279 tgc 281
|||
Sbjct: 104 tgc 106
Score = 40.1 bits (20), Expect = 0.001
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| ||| || ||||||||||| |||||||||
Sbjct: 103 gcaagcttgagacagcaactgcacaacttgcaagaa 68
>45525_miR444:micropc
Length = 94
Score = 89.7 bits (45), Expect = 1e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 219 ggttttcgggccataccgatgattttcttgcaagttgtgcagttgttgtctcaagct 275
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 57 ggttttcgaaccataccgataattttcttgcaagttgtgcagttgttgtctcaagct 1
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 33 agctcgaggcaacaactgcacaatttgcaagaa 65
|||| ||| |||||||||||||| |||||||||
Sbjct: 1 agcttgagacaacaactgcacaacttgcaagaa 33
>45175_miR444:micropc
Length = 98
Score = 89.7 bits (45), Expect = 1e-18
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 232 taccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 taccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 1
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 1 aagcttgagacaacaactgcacaacttgcaagaa 34
>46476_miR444:micropc
Length = 96
Score = 87.7 bits (44), Expect = 5e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccataccgataattttcttgcaagttgtgcagttgttgtctcaagctt 96
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaa 63
>45734_miR444:micropc
Length = 96
Score = 87.7 bits (44), Expect = 5e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccataccgataattttcttgcaagttgtgcagttgttgtctcaagctt 96
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaa 63
>45697_miR444:micropc
Length = 96
Score = 87.7 bits (44), Expect = 5e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccataccgataattttcttgcaagttgtgcagttgttgtctcaagctt 96
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaa 63
>45135_miR444:micropc
Length = 96
Score = 87.7 bits (44), Expect = 5e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccataccgatcattttcttgcaagttgtgcagttgttgtctcaagctt 96
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaa 63
>45024_miR444:micropc
Length = 96
Score = 87.7 bits (44), Expect = 5e-18
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 229 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 48 ccataccgataattttcttgcaagttgtgcagttgttgtctcaagctt 1
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| ||| |||||||||||||| |||||||||
Sbjct: 1 aagcttgagacaacaactgcacaacttgcaagaa 34
>45230_miR444:micropc
Length = 96
Score = 85.7 bits (43), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 219 ggttttcgggccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 39 ggttttcgaaccataccgataattttcttgcangttgtgcagttgttgtctcaagctt 96
>45562_miR444:micropc
Length = 96
Score = 83.8 bits (42), Expect = 7e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 219 ggttttcgggccataccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 39 ggttttcgaaccataccgataattttcttgcaagttgtgcagttgctgtctcaagctt 96
>45976_miR444:micropc
Length = 133
Score = 63.9 bits (32), Expect = 7e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 237 atgattttcttgcaagttgtgcagttgttgtctcaagctt 276
|||| ||||||||||||||||||||||||| |||||||||
Sbjct: 94 atgactttcttgcaagttgtgcagttgttgcctcaagctt 133
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| |||||||||||||||||| |||||||||
Sbjct: 133 aagcttgaggcaacaactgcacaacttgcaagaa 100
>45742_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 7e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 241 ttttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| |||||||||||||||||| |||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaa 70
>45712_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 7e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 241 ttttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| |||||||||||||||||| |||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaa 70
>45665_miR444:micropc
Length = 111
Score = 63.9 bits (32), Expect = 7e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 281
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 30 gcaagctcgaggcaacaactgcacaatttgcaagaa 65
||||||| |||||| ||||||||||| |||||||||
Sbjct: 108 gcaagcttgaggcagcaactgcacaacttgcaagaa 73
Score = 40.1 bits (20), Expect = 0.001
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagcttg 277
|||||||||||| ||||||||||| |||| |||||
Sbjct: 40 tttcttgcaagtaatgcagttgttgcctcatgcttg 5
>46669_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 3e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
||||||||||||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| |||||||||||||||||| |||||||||
Sbjct: 136 aagcttgaggcaacaactgcacaacttgcaagaa 103
>46544_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 3e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
||||||||||||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| |||||||||||||||||| |||||||||
Sbjct: 136 aagcttgaggcaacaactgcacaacttgcaagaa 103
>46412_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 3e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||||||||||||| ||||||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgctgtctcaagctt 1
>46601_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 2e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 281
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
>45144_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 2e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 281
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
>46299_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 7e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45960_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 7e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45334_miR444:micropc
Length = 101
Score = 54.0 bits (27), Expect = 7e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||||||||||||| || |||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 aagctcgaggcaacaactgcacaatttgcaagaa 65
||||| |||||| ||||||||||| |||||||||
Sbjct: 101 aagcttgaggcagcaactgcacaacttgcaagaa 68
>46094_miR444:micropc
Length = 151
Score = 48.1 bits (24), Expect = 4e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 281
|||||||||||| |||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcatgcagttgctgcctcaagcttgctgc 151
>46182_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
>44855_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 242 tttcttgcaagttgtgcagttgttgtctcaagctt 276
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
