miRNEST 2.0, an integrative microRNA resource :: BLAST
>48966_osa-miR399c:pmrd
Length = 110
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 103 tagccgtgcgtgccaaaggagaattgccctgcgattcac 141
||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 tagccatgcgtgccaaaggagaattgccctgcgattcac 108
>55093_zma-miR399c:pmrd
Length = 207
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 109 tgcgtgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||||||||||||
Sbjct: 164 tgcgtgccaaaggagaattgccctgcgattc 194
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 catgaattacagggtatatctcctttggcac 31
|||||||||||||||| |||||||||||||
Sbjct: 12 catgaattacagggtacgtctcctttggcac 42
>54489_sbi-miR399a:pmrd
Length = 137
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 109 tgcgtgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||||||||||||
Sbjct: 94 tgcgtgccaaaggagaattgccctgcgattc 124
>54491_sbi-miR399c:pmrd
Length = 130
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 110 gcgtgccaaaggagaattgccctgcgattc 139
||||||||||||||||||||||||||||||
Sbjct: 88 gcgtgccaaaggagaattgccctgcgattc 117
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 catgaattacagggtatatctcctttggcac 31
|||||||||||||||| ||||||||||||||
Sbjct: 12 catgaattacagggtacatctcctttggcac 42
>54689_tae-miR399:pmrd
Length = 126
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 104 agccgtgcgtgccaaaggagaattgccc 131
||||||||||||||||||||||||||||
Sbjct: 99 agccgtgcgtgccaaaggagaattgccc 126
>48964_osa-miR399a:pmrd
Length = 149
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 111 cgtgccaaaggagaattgccctgcgatt 138
||||||||||||||||||||||||||||
Sbjct: 117 cgtgccaaaggagaattgccctgcgatt 144
>48965_osa-miR399b:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 111 cgtgccaaaggagaattgccctgcgattca 140
|||||||||||||||||||||||| |||||
Sbjct: 65 cgtgccaaaggagaattgccctgccattca 94
>55101_zma-miR399k:pmrd
Length = 168
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 109 tgcgtgccaaaggagaattgccctg 133
|||||||||||||||||||||||||
Sbjct: 144 tgcgtgccaaaggagaattgccctg 168
>55091_zma-miR399a:pmrd
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattcac 141
|||||||||||||||||||||| ||||||
Sbjct: 84 tgccaaaggagaattgccctgccattcac 112
>53710_ptc-miRf11888-akr:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 113 tgccaaaggagaattgccctgcgattca 140
|||||||||||||||||||||| |||||
Sbjct: 28 tgccaaaggagaattgccctgccattca 1
>51753_ptc-miR399g:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattca 140
|||||||||||||||||||||| |||||
Sbjct: 65 tgccaaaggagaattgccctgccattca 92
>54884_vvi-miR399h:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||| ||||
Sbjct: 60 tgccaaaggagaattgccctgccattc 86
>54496_sbi-miR399h:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||| ||||
Sbjct: 93 tgccaaaggagaattgccctgccattc 119
>52804_ptc-miRf10982-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 113 tgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||| ||||
Sbjct: 27 tgccaaaggagaattgccctgccattc 1
>51752_ptc-miR399f:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||| ||||
Sbjct: 72 tgccaaaggagaattgccctgccattc 98
>50193_osa-miRf10978-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattc 139
|||||||||||||||||||||| ||||
Sbjct: 79 tgccaaaggagaattgccctgccattc 105
>54498_sbi-miR399j:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgc 134
||||||||||||||||||||||
Sbjct: 71 tgccaaaggagaattgccctgc 92
>55102_zma-miR399l:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctg 133
|||||||||||||||||||||
Sbjct: 65 tgccaaaggagaattgccctg 85
>54877_vvi-miR399a:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctg 133
|||||||||||||||||||||
Sbjct: 67 tgccaaaggagaattgccctg 87
>48970_osa-miR399g:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcgattcac 141
|||||||||||| |||||| |||||||||
Sbjct: 89 tgccaaaggagatttgcccagcgattcac 117
>54492_sbi-miR399d:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcga 136
|||||||||||| |||||||||||
Sbjct: 166 tgccaaaggagagttgccctgcga 189
>48967_osa-miR399d:pmrd
Length = 286
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 113 tgccaaaggagaattgccctgcga 136
|||||||||||| |||||||||||
Sbjct: 256 tgccaaaggagagttgccctgcga 279
