miRNEST 2.0, an integrative microRNA resource :: BLAST
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 5 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 65 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 125 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 5 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 65 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 125 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 244 bits (123), Expect = 2e-65
Identities = 164/177 (92%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 4 agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 64 ggatcccacagttctacccatctgcatg---ttttgtggtagtcttgtggcttccatatc 120
|||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 79 ggatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatt 138
Query: 121 tggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 177
||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 139 tggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctcta 195
>40435_gma-MIR159d:mirbase
Length = 103
Score = 129 bits (65), Expect = 8e-31
Identities = 94/103 (91%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 40 gggtggattgagctgcttagctatggatcccacagttctacccatctgcatgt---tttg 96
||||| |||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 97 tggtagtcttgtggcttccatatctggggagcttcatctgcct 139
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 103 bits (52), Expect = 4e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 3 gagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagcta 62
|||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 63 tggatcccacag 74
||||||||||||
Sbjct: 61 tggatcccacag 72
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 99.6 bits (50), Expect = 7e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 tggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagc 60
|||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
Query: 61 tatggatcccacag 74
||||||||||||||
Sbjct: 64 tatggatcccacag 77
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 150 atccttctttggattgaagggagctcta 177
|||||| |||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctcta 180
>40397_ahy-MIR159:mirbase
Length = 197
Score = 97.6 bits (49), Expect = 3e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 4 agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 63
|||||||||||||||||||||| |||| |||| ||||| |||||||||||| ||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 64 ggatcccacagttctacccat 84
|||||||||||| ||||||||
Sbjct: 61 ggatcccacagtactacccat 81
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 150 atccttctttggattgaagggagctcta 177
|||||| |||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 2 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 61
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 62 atggatcc 69
||||||||
Sbjct: 67 atggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctcta 177
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 2 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 61
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 62 atggatcc 69
||||||||
Sbjct: 67 atggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctcta 177
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 75.8 bits (38), Expect = 1e-14
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1 tggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagc 60
|||||||||||||||||||||||||| || | || | |||||| ||| |||||||| |||
Sbjct: 6 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 65
Query: 61 tatggatcccacag 74
|||| |||||||||
Sbjct: 66 tatgaatcccacag 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctcta 177
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 71.9 bits (36), Expect = 2e-13
Identities = 109/131 (83%), Gaps = 8/131 (6%)
Strand = Plus / Plus
Query: 49 gagctgcttagctatggatcccacagttctacccatctgcatgt--tttgtggtagtctt 106
||||||||||||||||| |||| || ||||||||||| ||| ||||||||||| ||
Sbjct: 48 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
Query: 107 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 166
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
Query: 167 agggagctcta 177
|||||||||||
Sbjct: 162 agggagctcta 172
>41218_csi-MIR159:mirbase
Length = 216
Score = 61.9 bits (31), Expect = 1e-10
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 2 ggagtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagc 60
|||||||||||||||||||||||| |||| ||| | |||| ||||||||||| |||
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 61 tatggatcccacagt 75
|||||||||||||||
Sbjct: 68 tatggatcccacagt 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctcta 177
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
>40311_bra-MIR159a:mirbase
Length = 185
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 153 cttctttggattgaagggagctcta 177
|||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 153 cttctttggattgaagggagctcta 177
|||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 153 cttctttggattgaagggagctcta 177
|||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 153 cttctttggattgaagggagctcta 177
|||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctcta 203
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 153 cttctttggattgaagggagctct 176
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 153 cttctttggattgaagggagctct 176
||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 tctttggattgaagggagctct 176
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 tctttggattgaagggagctct 176
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
