miRNEST 2.0, an integrative microRNA resource :: BLAST
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 61 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 61 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 242 bits (122), Expect = 7e-65
Identities = 163/176 (92%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79
Query: 61 gatcccacagttctacccatctgcatg---ttttgtggtagtcttgtggcttccatatct 117
||||||||||||||||||||| | | |||||||||||||||||||||||||||| |
Sbjct: 80 gatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatattt 139
Query: 118 ggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
|||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 140 ggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctcta 195
>40435_gma-MIR159d:mirbase
Length = 103
Score = 129 bits (65), Expect = 8e-31
Identities = 94/103 (91%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 36 gggtggattgagctgcttagctatggatcccacagttctacccatctgcatgt---tttg 92
||||| |||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 93 tggtagtcttgtggcttccatatctggggagcttcatctgcct 135
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 99.6 bits (50), Expect = 7e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||
Sbjct: 3 gtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatg 62
Query: 61 gatcccacag 70
||||||||||
Sbjct: 63 gatcccacag 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 146 atccttctttggattgaagggagctcta 173
|||||| |||||||||||||||||||||
Sbjct: 148 atccttgtttggattgaagggagctcta 175
>40397_ahy-MIR159:mirbase
Length = 197
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
Sbjct: 2 gtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatg 61
Query: 61 gatcccacagttctacccat 80
||||||||||| ||||||||
Sbjct: 62 gatcccacagtactacccat 81
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 146 atccttctttggattgaagggagctcta 173
|||||| |||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctcta 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||
Sbjct: 8 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
Query: 61 gatcccacag 70
||||||||||
Sbjct: 68 gatcccacag 77
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 146 atccttctttggattgaagggagctcta 173
|||||| |||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctcta 180
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 61 gatcc 65
|||||
Sbjct: 70 gatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 61 gatcc 65
|||||
Sbjct: 70 gatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 71.9 bits (36), Expect = 2e-13
Identities = 109/131 (83%), Gaps = 8/131 (6%)
Strand = Plus / Plus
Query: 45 gagctgcttagctatggatcccacagttctacccatctgcatgt--tttgtggtagtctt 102
||||||||||||||||| |||| || ||||||||||| ||| ||||||||||| ||
Sbjct: 48 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
Query: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
Query: 163 agggagctcta 173
|||||||||||
Sbjct: 162 agggagctcta 172
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 69
Query: 61 gatcccacag 70
|||||||||
Sbjct: 70 aatcccacag 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>41218_csi-MIR159:mirbase
Length = 216
Score = 56.0 bits (28), Expect = 9e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
||||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||||
Sbjct: 11 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 70
Query: 60 ggatcccacagt 71
||||||||||||
Sbjct: 71 ggatcccacagt 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
>40311_bra-MIR159a:mirbase
Length = 185
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctcta 173
|||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctcta 173
|||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctcta 173
|||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctcta 173
|||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctcta 203
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctct 172
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctct 172
||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctct 172
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctct 172
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctct 172
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
