miRNEST 2.0, an integrative microRNA resource :: BLAST
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 337 bits (170), Expect = 2e-93
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 6 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 66 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 125
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 126 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 337 bits (170), Expect = 2e-93
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 6 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 66 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 125
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 126 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 246 bits (124), Expect = 5e-66
Identities = 165/178 (92%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 5 agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 65 ggatcccacagttctacccatctgcatg---ttttgtggtagtcttgtggcttccatatc 121
|||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 79 ggatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatt 138
Query: 122 tggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 139 tggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctctac 196
>40435_gma-MIR159d:mirbase
Length = 103
Score = 129 bits (65), Expect = 8e-31
Identities = 94/103 (91%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 41 gggtggattgagctgcttagctatggatcccacagttctacccatctgcatgt---tttg 97
||||| |||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 98 tggtagtcttgtggcttccatatctggggagcttcatctgcct 140
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 103 bits (52), Expect = 4e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 4 gagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagcta 63
|||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 64 tggatcccacag 75
||||||||||||
Sbjct: 61 tggatcccacag 72
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 99.6 bits (50), Expect = 7e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 2 tggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagc 61
|||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
Query: 62 tatggatcccacag 75
||||||||||||||
Sbjct: 64 tatggatcccacag 77
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 151 atccttctttggattgaagggagctctac 179
|||||| ||||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctctac 181
>40397_ahy-MIR159:mirbase
Length = 197
Score = 97.6 bits (49), Expect = 3e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 5 agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 64
|||||||||||||||||||||| |||| |||| ||||| |||||||||||| ||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 65 ggatcccacagttctacccat 85
|||||||||||| ||||||||
Sbjct: 61 ggatcccacagtactacccat 81
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 151 atccttctttggattgaagggagctctac 179
|||||| ||||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctctac 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 63 atggatcc 70
||||||||
Sbjct: 67 atggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 63 atggatcc 70
||||||||
Sbjct: 67 atggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 77.8 bits (39), Expect = 3e-15
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 1 atggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttag 60
||||||||||||||||||||||||||| || | || | |||||| ||| |||||||| ||
Sbjct: 5 atggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgag 64
Query: 61 ctatggatcccacag 75
||||| |||||||||
Sbjct: 65 ctatgaatcccacag 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 73.8 bits (37), Expect = 4e-14
Identities = 110/132 (83%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 50 gagctgcttagctatggatcccacagttctacccatctgcatgt--tttgtggtagtctt 107
||||||||||||||||| |||| || ||||||||||| ||| ||||||||||| ||
Sbjct: 48 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
Query: 108 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 167
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
Query: 168 agggagctctac 179
||||||||||||
Sbjct: 162 agggagctctac 173
>41218_csi-MIR159:mirbase
Length = 216
Score = 61.9 bits (31), Expect = 2e-10
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 3 ggagtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagc 61
|||||||||||||||||||||||| |||| ||| | |||| ||||||||||| |||
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 62 tatggatcccacagt 76
|||||||||||||||
Sbjct: 68 tatggatcccacagt 82
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctctac 179
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>40311_bra-MIR159a:mirbase
Length = 185
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>40261_bna-MIR159:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctctac 182
>40016_ath-MIR159a:mirbase
Length = 184
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>39804_aly-MIR159a:mirbase
Length = 222
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctctac 204
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctct 177
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctct 177
||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188
