miRNEST 2.0, an integrative microRNA resource :: BLAST
>54378_pvu-miR159:pmrd
Length = 174
Score = 337 bits (170), Expect = 2e-93
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 6 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 66 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 125
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 126 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 337 bits (170), Expect = 2e-93
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 6 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 66 gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 125
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 126 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>48539_gma-miR159a:pmrd
Length = 214
Score = 246 bits (124), Expect = 5e-66
Identities = 165/178 (92%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 5 agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 65 ggatcccacagttctacccatctgcatg---ttttgtggtagtcttgtggcttccatatc 121
|||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 79 ggatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatt 138
Query: 122 tggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 139 tggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctctac 196
>54777_vvi-miR159c:pmrd
Length = 190
Score = 99.6 bits (50), Expect = 7e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 2 tggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagc 61
|||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
Query: 62 tatggatcccacag 75
||||||||||||||
Sbjct: 64 tatggatcccacag 77
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 151 atccttctttggattgaagggagctctac 179
|||||| ||||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctctac 181
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 2 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 61
Query: 63 atggatcc 70
||||||||
Sbjct: 62 atggatcc 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 63 atggatcc 70
||||||||
Sbjct: 67 atggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 3 ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 63 atggatcc 70
||||||||
Sbjct: 67 atggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 77.8 bits (39), Expect = 3e-15
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 1 atggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttag 60
||||||||||||||||||||||||||| || | || | |||||| ||| |||||||| ||
Sbjct: 5 atggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgag 64
Query: 61 ctatggatcccacag 75
||||| |||||||||
Sbjct: 65 ctatgaatcccacag 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>48699_mtr-miR159a:pmrd
Length = 168
Score = 71.9 bits (36), Expect = 2e-13
Identities = 109/131 (83%), Gaps = 8/131 (6%)
Strand = Plus / Plus
Query: 50 gagctgcttagctatggatcccacagttctacccatctgcatgt--tttgtggtagtctt 107
||||||||||||||||| |||| || ||||||||||| ||| ||||||||||| ||
Sbjct: 44 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 100
Query: 108 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 167
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 101 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 157
Query: 168 agggagctcta 178
|||||||||||
Sbjct: 158 agggagctcta 168
>48395_bra-miR159a:pmrd
Length = 185
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>48339_bna-miR159:pmrd
Length = 183
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctctac 182
>46931_ath-miR159a:pmrd
Length = 184
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctctac 179
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>46932_ath-miR159b:pmrd
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctct 177
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48701_mtr-miR159c:pmrd
Length = 44
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctctac 179
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctac 22
>48686_ltu-miR159:pmrd
Length = 345
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctctac 179
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctac 22