miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39382_pab-MIR397:mirbase
Length = 134
Score = 266 bits (134), Expect = 4e-72
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 7 agccgtggcaaccacatcattgagtgcagcgttgacgatagaaattccaccaatagattt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccgtggcaaccacatcattgagtgcagcgttgacgatagaaattccaccaatagattt 60
Query: 67 gataatatctatctatttgtggaatgccattgatattgttaaccctgcactcaatagtat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gataatatctatctatttgtggaatgccattgatattgttaaccctgcactcaatagtat 120
Query: 127 gtttgccaatggct 140
||||||||||||||
Sbjct: 121 gtttgccaatggct 134
>41143_tcc-MIR397:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 cacatcattgagtgcagcgttga 41
|||||||||||||||||||||||
Sbjct: 17 cacatcattgagtgcagcgttga 39
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 8 acatcattgagtgcagcgttga 29
>41244_csi-MIR397:mirbase
Length = 156
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 15 acatcattgagtgcagcgttga 36
>40380_rco-MIR397:mirbase
Length = 157
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 3 acatcattgagtgcagcgttga 24
>40298_bna-MIR397b:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 3 acatcattgagtgcagcgttga 24
>40297_bna-MIR397a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 3 acatcattgagtgcagcgttga 24
>40087_ath-MIR397a:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 8 acatcattgagtgcagcgttga 29
>39880_aly-MIR397b:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 16 acatcattgagtgcagcgttga 37
>39879_aly-MIR397a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 17 acatcattgagtgcagcgttga 38
>42037_osa-MIR397a:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttga 41
|||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttga 29
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttga 41
|||||||||||||||||||||
Sbjct: 30 catcattgagtgcagcgttga 50
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttga 41
|||||||||||||||||||||
Sbjct: 176 catcattgagtgcagcgttga 196
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttga 41
|||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttga 36
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttga 41
|||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttga 29
