miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39410_pab-MIR3709a:mirbase
          Length = 96

 Score =  190 bits (96), Expect = 2e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                       
Query: 19  aaattcaagaatttcagatgctttaaattcccgacagattcttgcgatgaccaaatggat 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaattcaagaatttcagatgctttaaattcccgacagattcttgcgatgaccaaatggat 60

                                               
Query: 79  ttcgggatttaaagcatttgaagctctggatttatg 114
           ||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttcgggatttaaagcatttgaagctctggatttatg 96




>39411_pab-MIR3709b:mirbase
          Length = 96

 Score = 85.7 bits (43), Expect = 7e-18
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 19  aaattcaagaatttcagatgctttaaattcccgacagattcttgcgatgaccaaatggat 78
           |||| |||||| || | |||| |||||||||||| | ||||  ||||||||| |||  ||
Sbjct: 1   aaatccaagaactttaaatgccttaaattcccgataaattcaggcgatgaccgaatatat 60

                                              
Query: 79  ttcgggatttaaagcatttgaagctctggatttat 113
           ||||||||||||||||||||||| |||||||||||
Sbjct: 61  ttcgggatttaaagcatttgaagttctggatttat 95