miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54411_sbi-miR164b:pmrd
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagca 102
|||||||||||||||||||||||
Sbjct: 40 gcacgtgccctgcttctccagca 18
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 gcacgtgccctgcttctccagca 102
|||||||||||||||||||||||
Sbjct: 58 gcacgtgccctgcttctccagca 80
>51621_ptc-miR164c:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagca 102
|||||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctccagca 8
>51619_ptc-miR164a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagca 102
|||||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctccagca 8
>48841_osa-miR164d:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagca 102
|||||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctccagca 8
>54952_zma-miR164d:pmrd
Length = 216
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagc 101
||||||||||||||||||||||
Sbjct: 39 gcacgtgccctgcttctccagc 18
>54949_zma-miR164a:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagc 101
||||||||||||||||||||||
Sbjct: 38 gcacgtgccctgcttctccagc 17
>51622_ptc-miR164d:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagc 101
||||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctccagc 9
>46942_ath-miR164c:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 78 tcgcacgtgccctgcttctcca 99
||||||||||||||||||||||
Sbjct: 32 tcgcacgtgccctgcttctcca 11
>54786_vvi-miR164b:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 84 gtgccctgcttctccagcatg 104
|||||||||||||||||||||
Sbjct: 26 gtgccctgcttctccagcatg 6
>51624_ptc-miR164f:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 84 gtgccctgcttctccagcatg 104
|||||||||||||||||||||
Sbjct: 26 gtgccctgcttctccagcatg 6
>47540_ath-miRf10440-akr:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 gcacgtgccctgcttctccagcatg 104
|||||||||||||||||||| ||||
Sbjct: 76 gcacgtgccctgcttctccaacatg 100
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 gcacgtgccctgcttctccagcatg 104
|||||||||||||||||||| ||||
Sbjct: 77 gcacgtgccctgcttctccaacatg 101
>46940_ath-miR164a:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctccagcatg 104
|||||||||||||||||||| ||||
Sbjct: 38 gcacgtgccctgcttctccaacatg 14
>54956_zma-miR164h:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 23 gcacgtgccctgcttctcca 4
>54955_zma-miR164g:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 20 gcacgtgccctgcttctcca 1
>54954_zma-miR164f:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 20 gcacgtgccctgcttctcca 1
>54953_zma-miR164e:pmrd
Length = 242
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 23 gcacgtgccctgcttctcca 4
>54951_zma-miR164c:pmrd
Length = 270
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 37 gcacgtgccctgcttctcca 18
>54950_zma-miR164b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 40 gcacgtgccctgcttctcca 21
>54788_vvi-miR164d:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>54787_vvi-miR164c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>54785_vvi-miR164a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>54676_tae-miR164b:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 20 gcacgtgccctgcttctcca 1
>54414_sbi-miR164e:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 22 gcacgtgccctgcttctcca 3
>54413_sbi-miR164d:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 20 gcacgtgccctgcttctcca 1
>54410_sbi-miR164:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 20 gcacgtgccctgcttctcca 1
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 34 gcacgtgccctgcttctcca 15
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 34 gcacgtgccctgcttctcca 15
>51623_ptc-miR164e:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>51620_ptc-miR164b:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>51348_ppl-miR164:pmrd
Length = 159
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 32 gcacgtgccctgcttctcca 13
>48843_osa-miR164f:pmrd
Length = 210
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 43 gcacgtgccctgcttctcca 24
>48839_osa-miR164b:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 28 gcacgtgccctgcttctcca 9
>48838_osa-miR164a:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 36 gcacgtgccctgcttctcca 17
>48710_mtr-miR164c:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 25 gcacgtgccctgcttctcca 6
>48709_mtr-miR164b:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 25 gcacgtgccctgcttctcca 6
>48708_mtr-miR164a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 25 gcacgtgccctgcttctcca 6
>48547_gma-miR164:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>48473_csi-miR164:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 20 gcacgtgccctgcttctcca 1
>48419_cav-miR164:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>48398_bra-miR164a:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 29 gcacgtgccctgcttctcca 10
>48341_bna-miR164:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 26 gcacgtgccctgcttctcca 7
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 25 gcacgtgccctgcttctcca 6
>46941_ath-miR164b:pmrd
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 gcacgtgccctgcttctcca 99
||||||||||||||||||||
Sbjct: 22 gcacgtgccctgcttctcca 3
