miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39384_pab-MIR482b:mirbase
Length = 121
Score = 220 bits (111), Expect = 2e-58
Identities = 114/115 (99%)
Strand = Plus / Plus
Query: 1 atgtggatggaagtcttgaggattgggaggataggagaaggctgtttgcttaattctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtggatggaagtcttgaggattgggaggataggagaaggctgtttgcttaattctcag 60
Query: 61 ttgaaacctgattagtcttctctattcctcccattcctattgcctccatcacaca 115
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaacctgattagtcttccctattcctcccattcctattgcctccatcacaca 115
>39385_pab-MIR482c:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tgtggatggaagtcttgaggattgggag 29
||||||||||||||||||||| ||||||
Sbjct: 23 tgtggatggaagtcttgaggagtgggag 50
>39383_pab-MIR482a:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 74 agtcttctctattcctcccattcctattgcctccatcaca 113
||||||| ||| ||||||||||||| |||||| |||||||
Sbjct: 76 agtcttccctactcctcccattcctgttgccttcatcaca 115
>39431_pta-MIR482c:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 74 agtcttctctattcctcccattcct 98
||||||| |||||||||||||||||
Sbjct: 56 agtcttccctattcctcccattcct 80
