miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39383_pab-MIR482a:mirbase
Length = 118
Score = 234 bits (118), Expect = 2e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 35 ttggaggagtggaaggatagggtaagactgcggttaagtgagtctgcttcaataattctt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggaggagtggaaggatagggtaagactgcggttaagtgagtctgcttcaataattctt 60
Query: 95 tgctctaatctcaccagtcttccctactcctcccattcctgttgccttcatcacagtt 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctctaatctcaccagtcttccctactcctcccattcctgttgccttcatcacagtt 118
>39385_pab-MIR482c:mirbase
Length = 137
Score = 63.9 bits (32), Expect = 4e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 109 cagtcttccctactcctcccattcctgttgccttcatcacagttcccttcccaacg 164
||||||| |||||||||||||||||| ||| ||||| |||| |||||||||||||
Sbjct: 82 cagtctttcctactcctcccattcctattggcttcaccacacatcccttcccaacg 137
>39384_pab-MIR482b:mirbase
Length = 121
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 110 agtcttccctactcctcccattcctgttgccttcatcaca 149
||||||||||| ||||||||||||| |||||| |||||||
Sbjct: 74 agtcttccctattcctcccattcctattgcctccatcaca 113
>39431_pta-MIR482c:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 100 taatctcaccagtcttccctactcctcccattcct 134
|||||||| |||||||||||| |||||||||||||
Sbjct: 46 taatctcatcagtcttccctattcctcccattcct 80
>39430_pta-MIR482b:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 108 ccagtcttccctactcctcccattcct 134
|||||||||||||||||||||||||||
Sbjct: 65 ccagtcttccctactcctcccattcct 91
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 38 gaggagtggaaggatagggtaagactgcggttaag 72
|||| ||||||||||||||||||||| |||||||
Sbjct: 1 gaggtgtggaaggatagggtaagactagggttaag 35
>39429_pta-MIR482a:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 108 ccagtcttccctactcctcccattcct 134
|||||||||||||||||||||||||||
Sbjct: 65 ccagtcttccctactcctcccattcct 91
>39432_pta-MIR482d:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 38 gaggagtggaaggatagggtaagactgcggttaag 72
|||| ||||||||||||||||||||| |||||||
Sbjct: 1 gaggtgtggaaggatagggtaagactaaggttaag 35
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 ccagtcttccctactcctcccattcct 134
|||||| ||||||||||||||||||||
Sbjct: 65 ccagtcctccctactcctcccattcct 91
>41687_vvi-MIR482:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 110 agtcttccctactcctcccattcct 134
|||||| ||||||||||||||||||
Sbjct: 84 agtctttcctactcctcccattcct 108
