miRNEST 2.0, an integrative microRNA resource :: BLAST
>39379_pab-MIR396a:mirbase
Length = 100
Score = 198 bits (100), Expect = 6e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 7 aatcccgccatgctcttccacagctttcttgaactaagagtcgatcggatccggtcagtt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcccgccatgctcttccacagctttcttgaactaagagtcgatcggatccggtcagtt 60
Query: 67 cagagctcaagaaagctgtgggaaaacatgggcggattcg 106
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagagctcaagaaagctgtgggaaaacatgggcggattcg 100
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtgggaaaacatgg 97
||||||||||||||||||||||||||||
Sbjct: 111 agctcaagaaagctgtgggaaaacatgg 138
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 gccatgctcttccacagctttcttgaact 41
|||||||| ||||||||||||||||||||
Sbjct: 12 gccatgcttttccacagctttcttgaact 40
>40086_ath-MIR396b:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtgggaaaacatg 96
|||||||||||||||||||||||||||
Sbjct: 106 agctcaagaaagctgtgggaaaacatg 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39878_aly-MIR396b:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtgggaaaacatg 96
|||||||||||||||||||||||||||
Sbjct: 134 agctcaagaaagctgtgggaaaacatg 160
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 gccatgctcttccacagctttcttgaact 41
|||||||| ||||||||||||||||||||
Sbjct: 5 gccatgcttttccacagctttcttgaact 33
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 tcaagaaagctgtgggaaaacatgg 97
||||||||||||||||||| |||||
Sbjct: 81 tcaagaaagctgtgggaaaccatgg 105
>41212_ccl-MIR396:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 69 gagctcaagaaagctgtgggaaaacatgg 97
||||||||||||||||||||| |||||||
Sbjct: 232 gagctcaagaaagctgtgggagaacatgg 260
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 catgctcttccacagctttcttgaact 41
|||||| ||||||||||||||||||||
Sbjct: 136 catgcttttccacagctttcttgaact 162
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 catgctcttccacagctttcttgaacta 42
|||||| |||||||||||||||||||||
Sbjct: 7 catgcttttccacagctttcttgaacta 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtggga 89
||||||||||||||||||||
Sbjct: 86 agctcaagaaagctgtggga 105
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtgggaaaacatgg 97
|||||||||||||||||||| |||||||
Sbjct: 118 agctcaagaaagctgtgggagaacatgg 145
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 catgctcttccacagctttcttgaact 41
|||||| ||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 catgctcttccacagctttcttgaact 41
|||||| ||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaact 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtgggaaaacatgg 97
||||||||||||| |||||| |||||||
Sbjct: 127 agctcaagaaagccgtgggagaacatgg 154
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtgggaaaacatg 96
||||||||||||| |||||||||||||
Sbjct: 141 agctcaagaaagccgtgggaaaacatg 167
>40476_gma-MIR396d:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 catgctcttccacagctttcttgaact 41
|||||| ||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaact 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtggga 89
||||||||||||||||||||
Sbjct: 78 agctcaagaaagctgtggga 97
>40474_gma-MIR396b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 catgctcttccacagctttcttgaact 41
|||||| ||||||||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaact 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtggga 89
||||||||||||||||||||
Sbjct: 88 agctcaagaaagctgtggga 107
>42814_zma-MIR396h:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 100 tcttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 113 tcttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>42461_sof-MIR396:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 4 tcttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 5 tcttccacagctttcttgaact 26
>40475_gma-MIR396c:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 atgctcttccacagctttcttgaact 41
||||| ||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaact 40
>40473_gma-MIR396a:mirbase
Length = 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 22 tcttccacagctttcttgaact 43
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 13 gccatgctcttccacagctttcttgaact 41
||||||| ||||||||||||||||||||
Sbjct: 12 gccatgcctttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 13 gccatgctcttccacagctttcttgaact 41
||||||| ||||||||||||||||||||
Sbjct: 2 gccatgcctttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 13 gccatgctcttccacagctttcttgaact 41
|||||| | ||||||||||||||||||||
Sbjct: 2 gccatgtttttccacagctttcttgaact 30
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 73 tcaagaaagctgtgggaaaacatgg 97
||||||||||||||| |||||||||
Sbjct: 27 tcaagaaagctgtggaaaaacatgg 3
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 13 gccatgctcttccacagctttcttgaact 41
|||||| | ||||||||||||||||||||
Sbjct: 12 gccatgttattccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgctcttccacagctttcttgaact 41
|||| ||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaact 25
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 agctcaagaaagctgtggga 89
||||||||||||||||||||
Sbjct: 69 agctcaagaaagctgtggga 88
>40379_rco-MIR396:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgctcttccacagctttcttgaact 41
|||| ||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaact 25
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 73 tcaagaaagctgtgggaaaacatg 96
||||||||||||||||| ||||||
Sbjct: 101 tcaagaaagctgtgggagaacatg 124
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 73 tcaagaaagctgtgggaaaacatg 96
||||||||||||||| ||||||||
Sbjct: 29 tcaagaaagctgtggaaaaacatg 6
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41242_csi-MIR396b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaact 39
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
