miRNEST 2.0, an integrative microRNA resource :: BLAST
>52339_ptc-miRf10517-akr:pmrd
Length = 164
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaactt 34
|||||||||||||||||||||||
Sbjct: 6 ttttccacggctttcttgaactt 28
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 aagctcaagaaagccgtgggaa 107
||||||||||||||||||||||
Sbjct: 137 aagctcaagaaagccgtgggaa 158
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 catatttttccacggctttcttga 30
|||||||| |||||||||||||||
Sbjct: 164 catattttcccacggctttcttga 141
>51740_ptc-miR396g:pmrd
Length = 168
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaactt 34
|||||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaactt 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 aagctcaagaaagccgtgggaa 107
||||||||||||||||||||||
Sbjct: 140 aagctcaagaaagccgtgggaa 161
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tcatatttttccacggctttcttga 30
||||||||| |||||||||||||||
Sbjct: 168 tcatattttcccacggctttcttga 144
>52919_ptc-miRf11097-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 ttttccacggctttcttgaact 33
||||||||||||||||||||||
Sbjct: 114 ttttccacggctttcttgaact 93
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 gaagctcaagaaagccgtggga 106
||||||||||||||||||||||
Sbjct: 28 gaagctcaagaaagccgtggga 7
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 ttttccacggctttcttgaacttcc 36
|||||||| ||||||||||||||||
Sbjct: 144 ttttccacagctttcttgaacttcc 120
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 ttccacggctttcttgaacttc 35
||||||||||||||||||||||
Sbjct: 10 ttccacggctttcttgaacttc 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tttttccacggctttcttgaacttcc 36
||||||||| ||||||||||||||||
Sbjct: 96 tttttccacagctttcttgaacttcc 71
>51739_ptc-miR396f:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaact 33
||||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaact 30
>51737_ptc-miR396d:pmrd
Length = 154
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 gaagctcaagaaagccgtggga 106
||||||||||||||||||||||
Sbjct: 125 gaagctcaagaaagccgtggga 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaacttcc 36
|||||||| ||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttcc 33
>51736_ptc-miR396c:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tttttccacggctttcttgaacttcc 36
||||||||| ||||||||||||||||
Sbjct: 8 tttttccacagctttcttgaacttcc 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 ttccacggctttcttgaacttc 35
||||||||||||||||||||||
Sbjct: 94 ttccacggctttcttgaacttc 73
>54584_smo-miR396:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaac 32
|||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaac 29
>51564_pta-miR396:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 tcatatttttccacggctttcttgaactt 34
||||| |||||||| ||||||||||||||
Sbjct: 9 tcatacttttccacagctttcttgaactt 37
>47009_ath-miR396b:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 tcatatttttccacggctttcttgaactt 34
||||| |||||||| ||||||||||||||
Sbjct: 3 tcatacttttccacagctttcttgaactt 31
>55077_zma-miR396f:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 gaagctcaagaaagccgtgggaag 108
|||| |||||||||||||||||||
Sbjct: 143 gaaggtcaagaaagccgtgggaag 166
>54869_vvi-miR396b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 12 ttttccacagctttcttgaacttc 35
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 136 ttttccacagctttcttgaacttc 113
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 136 ttttccacagctttcttgaacttc 113
>51738_ptc-miR396e:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttc 32
>48748_mtr-miR396a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 4 ttttccacagctttcttgaacttc 27
>48580_gma-miR396c:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 19 ttttccacagctttcttgaacttc 42
>48579_gma-miR396b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ttttccacggctttcttgaacttc 35
|||||||| |||||||||||||||
Sbjct: 19 ttttccacagctttcttgaacttc 42
