miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39396_pab-MIR3695:mirbase
          Length = 112

 Score =  222 bits (112), Expect = 1e-58
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                       
Query: 74  agccctcattgtcgcctggtcgttgtggggggttgatgatcgttactagaaaagtgaagt 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agccctcattgtcgcctggtcgttgtggggggttgatgatcgttactagaaaagtgaagt 60

                                                               
Query: 134 tttctagtaatggtcatcaagctcttacaacggccaggcgacattgcggact 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttctagtaatggtcatcaagctcttacaacggccaggcgacattgcggact 112



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                       
Query: 83  tgtcgcctggtcgttgtggggggttgatgatcgttactagaaaagtgaagttttctagta 142
           |||||||||| ||||||  | | ||||||| | ||||||||||| |  | ||||||||||
Sbjct: 103 tgtcgcctggccgttgtaagagcttgatgaccattactagaaaacttcacttttctagta 44

                                             
Query: 143 atggtcatcaagctcttacaacggccaggcgaca 176
           | | ||||||| | |  |||||| ||||||||||
Sbjct: 43  acgatcatcaaccccccacaacgaccaggcgaca 10