miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46764_miR169:micropc
Length = 89
Score = 176 bits (89), Expect = 4e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 60
Query: 103 ttcaggtaccgggtaagttgtcctcggct 131
|||||||||||||||||||||||||||||
Sbjct: 61 ttcaggtaccgggtaagttgtcctcggct 89
>46056_miR169:micropc
Length = 89
Score = 176 bits (89), Expect = 4e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 60
Query: 103 ttcaggtaccgggtaagttgtcctcggct 131
|||||||||||||||||||||||||||||
Sbjct: 61 ttcaggtaccgggtaagttgtcctcggct 89
>45629_miR169:micropc
Length = 89
Score = 176 bits (89), Expect = 4e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 60
Query: 103 ttcaggtaccgggtaagttgtcctcggct 131
|||||||||||||||||||||||||||||
Sbjct: 61 ttcaggtaccgggtaagttgtcctcggct 89
>45441_miR169:micropc
Length = 89
Score = 176 bits (89), Expect = 4e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctacaccttgttataggtatctgctagttatgccgatattgat 60
Query: 103 ttcaggtaccgggtaagttgtcctcggct 131
|||||||||||||||||||||||||||||
Sbjct: 61 ttcaggtaccgggtaagttgtcctcggct 89
>46644_miR169:micropc
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctac 63
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctac 22
>45996_miR169:micropc
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctac 63
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctac 21
>45589_miR169:micropc
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctac 63
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctac 21
>45529_miR169:micropc
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctac 63
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctac 22
>44839_miR169:micropc
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgcctac 63
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctac 22
>46840_miR169:micropc
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>46425_miR169:micropc
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>46188_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>46115_miR169:micropc
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>46045_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>46041_miR169:micropc
Length = 90
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45807_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45721_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45660_miR169:micropc
Length = 90
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45637_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45620_miR169:micropc
Length = 103
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45536_miR169:micropc
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45214_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45185_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45098_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45073_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>44953_miR169:micropc
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>44871_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccta 62
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
