miRNEST 2.0, an integrative microRNA resource :: BLAST
>39435_pta-MIR946b:mirbase
Length = 261
Score = 113 bits (57), Expect = 1e-25
Identities = 153/181 (84%), Gaps = 8/181 (4%)
Strand = Plus / Plus
Query: 39 cagagtgtatggatgtggatatggaagggttagtaaacggtacaaaacccacttaaagga 98
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 1 cagagtgtatggatgtggatatggaagggttagtaaacagtacaaaacccatttaataga 60
Query: 99 tattccgttagaggcatcattgttggctgctcgagatcaagcaactgtgttcaatttgat 158
||||| | || |||||||||||||||| | ||||||||||||||| | ||||||
Sbjct: 61 gattccatcgga-gcatcattgttggctgtt--agatcaagcaactgt----attttgat 113
Query: 159 ggccatactcactaaatgggtttcctgtttt-ctcttcaccagtccttctcctatccaac 217
||||| ||||| | |||||||| | |||||| || || ||||| |||| | |||||||||
Sbjct: 114 ggccacactcattgaatgggttgcttgttttgcttttaaccagccctttttctatccaac 173
Query: 218 t 218
|
Sbjct: 174 t 174
Score = 83.8 bits (42), Expect = 1e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 272 cctgtattttgacggccttgttcattaaatgggttggctgtttgctcttaactagacctt 331
|||||||||||| |||| || |||||||||||||| ||||| ||| || || || ||||
Sbjct: 176 cctgtattttgatggccatgctcattaaatgggttacctgttagctattcaccagccctt 235
Query: 332 ctcctatccacaattgtactagtttg 357
||||||||||||| ||||||||||||
Sbjct: 236 ctcctatccacaactgtactagtttg 261
Score = 69.9 bits (35), Expect = 1e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 153 tttgatggccatactcactaaatgggtttcctgttttctcttcaccagtccttctcctat 212
|||||||||||| |||| |||||||||| |||||| || |||||||| |||||||||||
Sbjct: 183 tttgatggccatgctcattaaatgggttacctgttagctattcaccagcccttctcctat 242
Query: 213 cca 215
|||
Sbjct: 243 cca 245
>39434_pta-MIR946a:mirbase
Length = 172
Score = 97.6 bits (49), Expect = 6e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 293 tcattaaatgggttggctgtttgctcttaactagaccttctcctatccacaattgtacta 352
||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 108 tcattaaatgggttggctgtttgctctgtaccagcccttctcctatccacaattgtacta 167
Query: 353 gtttg 357
|||||
Sbjct: 168 gtttg 172
Score = 77.8 bits (39), Expect = 6e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 39 cagagtgtatggatgtggatatggaagggttagtaaacggtacaaaaccca 89
||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1 cagagtgtatggatgtggatagagaagggttagtaaacggtagaaaaccca 51
Score = 67.9 bits (34), Expect = 6e-12
Identities = 80/95 (84%), Gaps = 4/95 (4%)
Strand = Plus / Plus
Query: 121 ttggctgctcgagatcaagcaactgtgttcaatttgatggccatactcactaaatgggtt 180
||||||| ||||||| ||||| |||| |||| |||||||||||||| ||||||||||
Sbjct: 66 ttggctgttcgagattaagcagctgt----aattcgatggccatactcattaaatgggtt 121
Query: 181 tcctgttttctcttcaccagtccttctcctatcca 215
|||||| |||| ||||| ||||||||||||||
Sbjct: 122 ggctgtttgctctgtaccagcccttctcctatcca 156
