miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9P775|YBEG_SCHPO Uncharacterized WD repeat_field-containing protein
C17D11.16 OS=Schizosaccharomyces pombe (strain ATCC
38366 / 972) GN=SPBC1711.16 PE=1 SV=1
Length = 516
Score = 53.5 bits (127), Expect = 4e-07
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = -2
Query: 146 MTIKPFDLIILSARNEDDVSHLEVWIYEEETEEGGSNMYVHHDIILP 6
M I P D ++L+AR ED++SH+EV++Y E TEE N+YVHHD +LP
Sbjct: 139 MQILPTDSLLLAARTEDNLSHVEVYVY-EPTEE---NLYVHHDFLLP 181
>sp|P21304|PWP1_YEAST Periodic tryptophan protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PWP1 PE=1
SV=1
Length = 576
Score = 43.9 bits (102), Expect = 3e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Frame = -2
Query: 146 MTIKPFDLIILSARNEDDVSHLEVWIYEE---------ETEEGGS-------------NM 33
+ + P D ++L+AR EDDVS+L++++Y++ EEG +
Sbjct: 138 LQVYPSDNLVLAARTEDDVSYLDIYVYDDGAGFHSSDIPVEEGDEADPDVARGLVRDPAL 197
Query: 32 YVHHDIILPA 3
YVHHD++LPA
Sbjct: 198 YVHHDLMLPA 207
