miRNEST 2.0, an integrative microRNA resource :: BLAST
>39426_pta-MIR396:mirbase
Length = 119
Score = 236 bits (119), Expect = 3e-63
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 8 gaatcttgtcatacttttccacagctttcttgaactttacgtgtacgggacgaggagatt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatcttgtcatacttttccacagctttcttgaactttacgtgtacgggacgaggagatt 60
Query: 68 ctgatttctacgtctgcgattaaagttcaagaaaactgtgggaaagcatggtaggattc 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgatttctacgtctgcgattaaagttcaagaaaactgtgggaaagcatggtaggattc 119
>40086_ath-MIR396b:mirbase
Length = 135
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaacttt 45
|||||||||||||||||||||||||||||||
Sbjct: 2 gtcatacttttccacagctttcttgaacttt 32
>39878_aly-MIR396b:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaacttt 45
|||||| ||||||||||||||||||||||||
Sbjct: 23 gtcatatttttccacagctttcttgaacttt 53
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 tgtcatacttttccacagctttcttgaact 43
|||||| |||||||||||||||||||||||
Sbjct: 4 tgtcatgcttttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaactt 44
||||| ||||||||||||||||||||||||
Sbjct: 2 gtcatgcttttccacagctttcttgaactt 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 90 aagttcaagaaaactgtgggaaagcatg 117
|||||||||||| |||||| ||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaagcatg 4
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaactt 44
||||| ||||||||||||||||||||||||
Sbjct: 2 gtcatgcttttccacagctttcttgaactt 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 90 aagttcaagaaaactgtgggaaagcatg 117
|||||||||||| |||||| ||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaagcatg 4
>41212_ccl-MIR396:mirbase
Length = 277
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaactt 44
||||| ||||||||||||||||||||||||
Sbjct: 134 gtcatgcttttccacagctttcttgaactt 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 90 aagttcaagaaaactgtgggaaagcatg 117
|||||||||||| |||||| ||||||||
Sbjct: 163 aagttcaagaaagctgtggaaaagcatg 136
>40476_gma-MIR396d:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaactt 44
||||| ||||||||||||||||||||||||
Sbjct: 2 gtcatgcttttccacagctttcttgaactt 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 90 aagttcaagaaaactgtgggaaagcatg 117
|||||||||||| |||||| ||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaagcatg 4
>40474_gma-MIR396b:mirbase
Length = 126
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 gtcatacttttccacagctttcttgaactt 44
||||| ||||||||||||||||||||||||
Sbjct: 12 gtcatgcttttccacagctttcttgaactt 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 90 aagttcaagaaaactgtgggaaagcatg 117
|||||||||||| |||||| ||||||||
Sbjct: 41 aagttcaagaaagctgtggaaaagcatg 14
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaacttt 45
|||||||||||||||||||||||||
Sbjct: 18 cttttccacagctttcttgaacttt 42
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 89 aaagttcaagaaaactgtgggaaagcatgg 118
||||||||||||| |||||| |||||||||
Sbjct: 42 aaagttcaagaaagctgtggaaaagcatgg 13
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaactt 44
||||||||||||||||||||||||
Sbjct: 11 cttttccacagctttcttgaactt 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 aagttcaagaaaactgtgggaaagcatggtagga 123
|||||||||||| |||||| ||||||||| ||||
Sbjct: 34 aagttcaagaaagctgtggaaaagcatggcagga 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 90 aagttcaagaaaactgtgggaaagcatgg 118
|||||||||||| |||||||||| |||||
Sbjct: 77 aagttcaagaaagctgtgggaaaccatgg 105
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaactt 44
||||||||||||||||||||||||
Sbjct: 3 cttttccacagctttcttgaactt 26
>40475_gma-MIR396c:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaactt 44
||||||||||||||||||||||||
Sbjct: 18 cttttccacagctttcttgaactt 41
>40379_rco-MIR396:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaactt 44
||||||||||||||||||||||||
Sbjct: 3 cttttccacagctttcttgaactt 26
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttttccacagctttcttgaactt 44
|||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaactt 31
>41243_csi-MIR396c:mirbase
Length = 178
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttttccacagctttcttgaactt 44
|||||||||||||||||||||||
Sbjct: 11 ttttccacagctttcttgaactt 33
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 14 tgtcatacttttccacagctttcttgaactt 44
|||||| ||||||||| ||||||||||||||
Sbjct: 134 tgtcatgcttttccacggctttcttgaactt 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaactt 44
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactt 41
>42812_zma-MIR396f:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tttccacagctttcttgaactt 44
||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaactt 22
>42811_zma-MIR396e:mirbase
Length = 166
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tttccacagctttcttgaactt 44
||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaactt 22
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tttccacagctttcttgaactt 44
||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaactt 41
>42028_osa-MIR396c:mirbase
Length = 141
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tttccacagctttcttgaactt 44
||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaactt 31
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tttccacagctttcttgaactt 44
||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaactt 52
>41242_csi-MIR396b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 ttttccacagctttcttgaact 43
||||||||||||||||||||||
Sbjct: 18 ttttccacagctttcttgaact 39
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaacttt 45
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaacttt 22
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 ttttccacagctttcttgaact 43
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>40296_bna-MIR396a:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaacttt 45
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaacttt 22
>39381_pab-MIR396c:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 16 tcatacttttccacagctttcttgaactt 44
||||| |||||||| ||||||||||||||
Sbjct: 17 tcatatttttccacggctttcttgaactt 45
>39380_pab-MIR396b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 16 tcatacttttccacagctttcttgaactt 44
||||| |||||||| ||||||||||||||
Sbjct: 1 tcatagttttccacggctttcttgaactt 29
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaactt 44
||||||||| ||||||||||||||
Sbjct: 8 cttttccacggctttcttgaactt 31
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 ttttccacagctttcttgaa 41
||||||||||||||||||||
Sbjct: 109 ttttccacagctttcttgaa 90
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 cttttccacagctttcttgaactt 44
||||||||| ||||||||||||||
Sbjct: 18 cttttccacggctttcttgaactt 41
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39379_pab-MIR396a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 ttccacagctttcttgaact 43
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
