miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>51429_ppt-miR536f:pmrd
          Length = 176

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 48  tcgtgccaagctgtgtgcatct 69
           ||||||||||||||||||||||
Sbjct: 128 tcgtgccaagctgtgtgcatct 149

>51428_ppt-miR536e:pmrd
          Length = 464

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  tcgtgccaagctgtgtgca 66
           |||||||||||||||||||
Sbjct: 440 tcgtgccaagctgtgtgca 458

>51427_ppt-miR536d:pmrd
          Length = 443

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  tcgtgccaagctgtgtgca 66
           |||||||||||||||||||
Sbjct: 397 tcgtgccaagctgtgtgca 415

>51425_ppt-miR536b:pmrd
          Length = 222

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  tcgtgccaagctgtgtgca 66
           |||||||||||||||||||
Sbjct: 152 tcgtgccaagctgtgtgca 170

>51424_ppt-miR536a:pmrd
          Length = 199

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  tcgtgccaagctgtgtgca 66
           |||||||||||||||||||
Sbjct: 164 tcgtgccaagctgtgtgca 182