miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54829_vvi-miR171b:pmrd
          Length = 99

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 77/88 (87%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                       
Query: 43  aggtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtat 100
           ||||||||||| |||||||||||||||| |||||| |||  |  || |||||||||||  
Sbjct: 8   aggtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtga 66

                                       
Query: 101 tttcattgagccgcgtcaatatctcctt 128
           ||| ||||||||||||||||||||||||
Sbjct: 67  tttgattgagccgcgtcaatatctcctt 94




>48566_gma-miR170n:pmrd
          Length = 80

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 43 aggtattggcgcgcctcaatttaaagacgtggttaa 78
          ||||||||||| |||||||||| ||||| |||||||
Sbjct: 1  aggtattggcgtgcctcaatttgaagacatggttaa 36



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Plus

                                             
Query: 91  agccatgta-ttttcattgagccgcgtcaatatc 123
           ||||||||| |||| |||||||||||||||||||
Sbjct: 47  agccatgtaattttaattgagccgcgtcaatatc 80




>54459_sbi-miR171h:pmrd
          Length = 81

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 105 attgagccgcgtcaatatctc 125
           |||||||||||||||||||||
Sbjct: 61  attgagccgcgtcaatatctc 81




>48903_osa-miR171i:pmrd
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 105 attgagccgcgtcaatatctc 125
           |||||||||||||||||||||
Sbjct: 90  attgagccgcgtcaatatctc 110