miRNEST 2.0, an integrative microRNA resource :: BLAST
>41218_csi-MIR159:mirbase
Length = 216
Score = 305 bits (154), Expect = 7e-84
Identities = 189/200 (94%), Gaps = 3/200 (1%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 68
Query: 61 atggatcccacagtcctatgtatcagattttagggtttgtttctgatgatgatgattata 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 69 atggatcccacagtcctatgtatcagattttagggtttgtttctgatgatggtgatgata 128
Query: 121 ggcctgtggcttgcatatctctggagctttattaccccttaagttttatcc---tttttt 177
||| |||||||||||||| |||||| ||| ||||||||||||||||| || ||||||
Sbjct: 129 ggcttgtggcttgcatatttctggaccttcattaccccttaagtttttaccccttttttt 188
Query: 178 ggattgaagggagctctacc 197
||||||||||||||||||||
Sbjct: 189 ggattgaagggagctctacc 208
>40338_rco-MIR159:mirbase
Length = 180
Score = 93.7 bits (47), Expect = 5e-20
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 60
||||||||||||||||||||||| ||||| ||| | | ||||| ||||||||||||||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttg-atgggtagattgagctgctgagct 59
Query: 61 atggatcccacagtcctat 79
||||||||||||| |||||
Sbjct: 60 atggatcccacagccctat 78
Score = 63.9 bits (32), Expect = 4e-11
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 118 ataggcctgtggcttgcatatctctggagctttattaccccttaagttttatcctttttt 177
|||||| ||||||||||||||||| ||||||| |||| |||| || |||||| |||
Sbjct: 100 ataggcttgtggcttgcatatctcaggagcttcatta--ccttgtattagatccttgttt 157
Query: 178 ggattgaagggagctctac 196
|||||||||||||||||||
Sbjct: 158 ggattgaagggagctctac 176
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 81.8 bits (41), Expect = 2e-16
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 60
||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagct 66
Query: 61 atggatcccacagtcctatgtatca 85
|||||| |||||||||||| |||||
Sbjct: 67 atggat-ccacagtcctatctatca 90
Score = 58.0 bits (29), Expect = 3e-09
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 128 ggcttgcatatctctggagctttattaccccttaagttttatccttttttggattgaagg 187
|||||||||||||| ||||||||||| || | | ||| |||| |||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagctttattgcc--taatgttagatccctttttggattgaagg 166
Query: 188 gagctcta 195
||||||||
Sbjct: 167 gagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 81.8 bits (41), Expect = 2e-16
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 60
||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagct 66
Query: 61 atggatcccacagtcctatgtatca 85
|||||| |||||||||||| |||||
Sbjct: 67 atggat-ccacagtcctatctatca 90
Score = 58.0 bits (29), Expect = 3e-09
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 128 ggcttgcatatctctggagctttattaccccttaagttttatccttttttggattgaagg 187
|||||||||||||| ||||||||||| || | | ||| |||| |||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagctttattgcc--taatgttagatccctttttggattgaagg 166
Query: 188 gagctcta 195
||||||||
Sbjct: 167 gagctcta 174
>40397_ahy-MIR159:mirbase
Length = 197
Score = 73.8 bits (37), Expect = 4e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagcta 61
|||||||||||||||||||||| ||||| ||| | ||||| ||||||||||| |||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggt-gggtagattgagctgctaagcta 59
Query: 62 tggatcccacagt 74
|||||||||||||
Sbjct: 60 tggatcccacagt 72
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 168 atccttttttggattgaagggagctctac 196
|||||| ||||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctctac 178
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 71.9 bits (36), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 121 ggcctgtggcttgcatatctctggagctttattaccccttaagttttatccttttttgga 180
|||||| |||||||||||||| |||||||||||||| | | ||| ||| |||||||||
Sbjct: 106 ggcctgcggcttgcatatctcaggagctttattacc--taatgttagatctttttttgga 163
Query: 181 ttgaagggagctcta 195
|||||||||||||||
Sbjct: 164 ttgaagggagctcta 178
Score = 61.9 bits (31), Expect = 2e-10
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 60
||||||||||||||||||||||| ||| | || || ||||| || |||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagct 66
Query: 61 atggatcccacagtcctat 79
||| ||||||||| |||||
Sbjct: 67 atgaatcccacagccctat 85
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 69.9 bits (35), Expect = 7e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagct 60
||||||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| |
Sbjct: 6 gagtggagctccttgaagtccaatagagggtcttac-tgggtagattgagctgctgactt 64
Query: 61 atggatcccacagtcctat 79
||||||||||||| |||||
Sbjct: 65 atggatcccacagccctat 83
Score = 60.0 bits (30), Expect = 7e-10
Identities = 69/80 (86%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 118 ataggcctgtggcttgcatatctctggagctttattaccccttaagtttt-atccttttt 176
|||||| ||||||||||||||||| |||||| |||| || |||||| |||||| ||
Sbjct: 105 ataggcttgtggcttgcatatctcaggagctgcattatcc---aagtttagatccttgtt 161
Query: 177 tggattgaagggagctctac 196
||||||||||||||||||||
Sbjct: 162 tggattgaagggagctctac 181
>40432_gma-MIR159a:mirbase
Length = 214
Score = 65.9 bits (33), Expect = 1e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagcta 61
|||||||||||||||||||||| |||| ||| | |||| |||||||||||| |||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagcta 77
Query: 62 tggatcccacagt 74
|||||||||||||
Sbjct: 78 tggatcccacagt 90
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 170 ccttttttggattgaagggagctctac 196
|||| ||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctac 196
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 56.0 bits (28), Expect = 1e-08
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 62
||||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
Query: 63 ggatcccacagt 74
||||||||||||
Sbjct: 60 ggatcccacagt 71
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 168 atccttttttggattgaagggagctctac 196
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 56.0 bits (28), Expect = 1e-08
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 62
||||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
Query: 63 ggatcccacagt 74
||||||||||||
Sbjct: 60 ggatcccacagt 71
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 168 atccttttttggattgaagggagctctac 196
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>40435_gma-MIR159d:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 39 gggtaaattgagctgctgagctatggatcccacagt 74
|||| |||||||||||| ||||||||||||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagt 36
>41528_sly-MIR159:mirbase
Length = 177
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 163 gttttatccttttttggattgaagggagctcta 195
|||| ||| ||||||||||||||||||||||||
Sbjct: 145 gtttgatcattttttggattgaagggagctcta 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 4 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 63
|||||||||||||||||||| | | |||| || || |||||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatg 59
Query: 64 gatcccacagtcctat 79
||| || ||| |||||
Sbjct: 60 gattcctcagccctat 75
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 125 tgtggcttgcatatctctggagctttattaccccttaagttttatccttttttggattga 184
|||||||| ||||||| ||||| |||| ||| || ||||| ||| || ||||||||||
Sbjct: 104 tgtggcttccatatctagggagccttatcacc--tttagtttaatctttctttggattga 161
Query: 185 agggagctctac 196
||||||||||||
Sbjct: 162 agggagctctac 173
>40311_bra-MIR159a:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctac 196
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>40261_bna-MIR159:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctac 196
||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctac 182
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctac 196
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctac 196
||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctac 204
