miRNEST 2.0, an integrative microRNA resource :: BLAST
>41218_csi-MIR159:mirbase
Length = 216
Score = 125 bits (63), Expect = 1e-29
Identities = 148/171 (86%), Gaps = 4/171 (2%)
Strand = Plus / Plus
Query: 3 gttaaagagtggaactccttgaagtccaaaagagggtctagcaagggtaaattgagctgg 62
||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3 gttaaggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgc 62
Query: 63 tgagctatggatccc-cagtccctagtatcacattttaagggttggttcttgatgaatga 121
||||||||||||||| |||||| |||||| ||||| |||||| ||| ||||| |||
Sbjct: 63 tgagctatggatcccacagtcctatgtatcagatttt-agggtttgtttctgatg-atgg 120
Query: 122 tgattataggcctgtggcttacttatctctgaaacctttattaccccttaa 172
|||| |||||| |||||||| | ||| |||| ||||| ||||||||||||
Sbjct: 121 tgatgataggcttgtggcttgcatatttctg-gaccttcattaccccttaa 170
>40338_rco-MIR159:mirbase
Length = 180
Score = 65.9 bits (33), Expect = 1e-11
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 gagtggaactccttgaagtccaaaagagggtctagcaagggtaaattgagctggtgagct 68
||||||| ||||||||||||||| ||||| ||| | | ||||| ||||||||| ||||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttg-atgggtagattgagctgctgagct 59
Query: 69 atggatccc 77
|||||||||
Sbjct: 60 atggatccc 68
>40397_ahy-MIR159:mirbase
Length = 197
Score = 56.0 bits (28), Expect = 1e-08
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 agtggaactccttgaagtccaaaagagggtctagcaagggtaaattgagctggtgagcta 69
|||||| ||||||||||||||| ||||||||| | ||||| ||||||||| | |||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttg-gtgggtagattgagctgctaagcta 59
Query: 70 tggatccc 77
||||||||
Sbjct: 60 tggatccc 67
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 54.0 bits (27), Expect = 5e-08
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 gagtggaactccttgaagtccaaaagagggtctagcaagggtaaattgagctggtgagct 68
||||||| ||||||||||||||| ||||| ||| || ||||| ||| ||||| | ||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagct 66
Query: 69 atggatccccagtcc 83
|||||||| ||||||
Sbjct: 67 atggatccacagtcc 81
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 54.0 bits (27), Expect = 5e-08
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 gagtggaactccttgaagtccaaaagagggtctagcaagggtaaattgagctggtgagct 68
||||||| ||||||||||||||| ||||| ||| || ||||| ||| ||||| | ||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagct 66
Query: 69 atggatccccagtcc 83
|||||||| ||||||
Sbjct: 67 atggatccacagtcc 81
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 50.1 bits (25), Expect = 7e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 gagtggaactccttgaagtccaaaagagggtct 41
||||||| ||||||||||||||| |||||||||
Sbjct: 6 gagtggagctccttgaagtccaatagagggtct 38
