miRNEST 2.0, an integrative microRNA resource :: BLAST
>41245_csi-MIR398:mirbase
Length = 225
Score = 250 bits (126), Expect = 3e-67
Identities = 167/178 (93%), Gaps = 7/178 (3%)
Strand = Plus / Plus
Query: 2 caacagatgtgaaaccccagaggagtgaacgtgagaacacagggtggcgttggcttaaat 61
|||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||
Sbjct: 1 caacagatgtgaaaccccagaggagtgatcctgagaacagagggtggcgttggcttaaat 60
Query: 62 ttgattttgcattgctgctgcctgctcctgccatgccatacattaaattaaaaaagattg 121
||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 61 ttgattt-gcattgctgctgcctgctcctgccat-----acattaaatcaaaa-agattg 113
Query: 122 tatgtggccaacgcaccttgtgttctcaggtcacccctttgggaattcaattgtcaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tatgtggccaacgcaccttgtgttctcaggtcacccctttgggaattcaattgtcaat 171
>41078_gra-MIR398:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 138 cttgtgttctcaggtcacccctttggg 164
|||||||||||||||||||||||||||
Sbjct: 64 cttgtgttctcaggtcacccctttggg 90
>41059_ghr-MIR398:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 138 cttgtgttctcaggtcacccctttggg 164
|||||||||||||||||||||||||||
Sbjct: 64 cttgtgttctcaggtcacccctttggg 90
>40403_ahy-MIR398:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 136 accttgtgttctcaggtcacccctttg 162
|||||||||||||||||||||||||||
Sbjct: 125 accttgtgttctcaggtcacccctttg 151
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 cagaggagtgaacgtgagaacaca 42
||||||||||||| ||||||||||
Sbjct: 6 cagaggagtgaacctgagaacaca 29
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttggg 164
||||||||||||||||||||||||||
Sbjct: 100 ttgtgttctcaggtcacccctttggg 125
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttggg 164
||||||||||||||||||||||||||
Sbjct: 72 ttgtgttctcaggtcacccctttggg 97
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttggg 164
||||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttggg 90
>42039_osa-MIR398a:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 140 tgtgttctcaggtcacccctttggg 164
|||||||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccctttggg 109
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 140 tgtgttctcaggtcacccctttggg 164
|||||||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccctttggg 104
>40381_rco-MIR398a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 140 tgtgttctcaggtcacccctttggg 164
|||||||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccctttggg 90
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttg 162
||||||||||||||||||||||||
Sbjct: 72 ttgtgttctcaggtcacccctttg 95
>40479_gma-MIR398b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttg 162
||||||||||||||||||||||||
Sbjct: 95 ttgtgttctcaggtcacccctttg 118
>40478_gma-MIR398a:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttg 162
||||||||||||||||||||||||
Sbjct: 76 ttgtgttctcaggtcacccctttg 99
>40308_bol-MIR398a:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttg 162
||||||||||||||||||||||||
Sbjct: 70 ttgtgttctcaggtcacccctttg 93
>40089_ath-MIR398a:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttg 162
||||||||||||||||||||||||
Sbjct: 74 ttgtgttctcaggtcacccctttg 97
>39881_aly-MIR398a:mirbase
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctttg 162
||||||||||||||||||||||||
Sbjct: 121 ttgtgttctcaggtcacccctttg 144
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 139 ttgtgttctcaggtcacccctt 160
||||||||||||||||||||||
Sbjct: 124 ttgtgttctcaggtcacccctt 145
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 tgtgttctcaggtcacccct 159
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 tgtgttctcaggtcacccct 159
||||||||||||||||||||
Sbjct: 86 tgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 140 tgtgttctcaggtcacccct 159
||||||||||||||||||||
Sbjct: 91 tgtgttctcaggtcacccct 110
