miRNEST 2.0, an integrative microRNA resource :: BLAST
>45814_miR408:micropc
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 agacggggaacaggcagagcatggatggaactattaacag-gttccctgttttggctcct 67
||||||||||||||||||||||||||||| ||| |||||| | | |||||||||||
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 60
Query: 68 cccatgcactgcctcttccctggct 92
|||||||||||||||||||||||||
Sbjct: 61 cccatgcactgcctcttccctggct 85
>45593_miR408:micropc
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 agacggggaacaggcagagcatggatggaactattaacag-gttccctgttttggctcct 67
||||||||||||||||||||||||||||| ||| |||||| | | |||||||||||
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctcta 60
Query: 68 cccatgcactgcctcttccctggct 92
|||||||||||||||||||||||||
Sbjct: 61 cccatgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 85.7 bits (43), Expect = 5e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 10 gacggggaacaggcagagcatggatggaactattaacag-gttccctgttttggctcctc 68
|||||||||||||||||||||||||||| ||| |||||| | | ||||||||||| |
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctac 60
Query: 69 ccatgcactgcctcttccctggc 91
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>46401_miR408:micropc
Length = 83
Score = 85.7 bits (43), Expect = 5e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 10 gacggggaacaggcagagcatggatggaactattaacag-gttccctgttttggctcctc 68
|||||||||||||||||||||||||||| ||| |||||| | | ||||||||||| |
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 60
Query: 69 ccatgcactgcctcttccctggc 91
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 85.7 bits (43), Expect = 5e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 10 gacggggaacaggcagagcatggatggaactattaacag-gttccctgttttggctcctc 68
|||||||||||||||||||||||||||| ||| |||||| | | ||||||||||| |
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctac 60
Query: 69 ccatgcactgcctcttccctggc 91
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 85.7 bits (43), Expect = 5e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 10 gacggggaacaggcagagcatggatggaactattaacag-gttccctgttttggctcctc 68
|||||||||||||||||||||||||||| ||| |||||| | | ||||||||||| |
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 60
Query: 69 ccatgcactgcctcttccctggc 91
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>46359_miR408:micropc
Length = 85
Score = 75.8 bits (38), Expect = 5e-15
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatggaactattaacag--gttccctgttttggctcctccca 71
|||||||||||||||||||||| | |||||||||| || ||||||||||| | | ||
Sbjct: 5 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 64
Query: 72 tgcactgcctcttccctggct 92
|||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggct 85
>46309_miR408:micropc
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatggaactattaacag--gttccctgttttggctcctccca 71
|||||||||||||||||||||| | |||||||||| || ||||||||||| | | ||
Sbjct: 4 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 63
Query: 72 tgcactgcctcttccctggc 91
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>46155_miR408:micropc
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatggaactattaacag--gttccctgttttggctcctccca 71
|||||||||||||||||||||| | |||||||||| || ||||||||||| | | ||
Sbjct: 4 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 63
Query: 72 tgcactgcctcttccctggc 91
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>45398_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 54 ctgttttggctcctcccatgcactgcctcttccctggct 92
||||| ||||||| | |||||||||||||||||||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 54 ctgttttggctcctcccatgcactgcctcttccctggc 91
||||| ||||||| | ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 54 ctgttttggctcctcccatgcactgcctcttccctggc 91
||||| ||||||| | ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45531_miR408:micropc
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggct 92
|||||||||||||||||||||||
Sbjct: 67 catgcactgcctcttccctggct 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 9 agacggggaacaggcagagcatggatgga 37
|||| ||||||||| ||||||||||||||
Sbjct: 1 agacagggaacaggtagagcatggatgga 29
>45394_miR408:micropc
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggct 92
|||||||||||||||||||||||
Sbjct: 90 catgcactgcctcttccctggct 112
>44861_miR408:micropc
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggct 92
|||||||||||||||||||||||
Sbjct: 99 catgcactgcctcttccctggct 121
>46728_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggc 91
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgga 37
||||||||| ||||||||||||||
Sbjct: 5 gggaacaggtagagcatggatgga 28
>46159_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggc 91
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgga 37
||||||||| ||||||||||||||
Sbjct: 5 gggaacaggtagagcatggatgga 28
>45949_miR408:micropc
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggc 91
||||||||||||||||||||||
Sbjct: 78 catgcactgcctcttccctggc 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 20 aggcagagcatggatggaactattaaca 47
|||||||||||||||||| |||| ||||
Sbjct: 10 aggcagagcatggatggagctatcaaca 37
>45551_miR408:micropc
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggc 91
||||||||||||||||||||||
Sbjct: 78 catgcactgcctcttccctggc 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 20 aggcagagcatggatggaactattaaca 47
|||||||||||||||||| |||| ||||
Sbjct: 10 aggcagagcatggatggagctatcaaca 37
>44968_miR408:micropc
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggc 91
||||||||||||||||||||||
Sbjct: 89 catgcactgcctcttccctggc 110
>44821_miR408:micropc
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 catgcactgcctcttccctggc 91
||||||||||||||||||||||
Sbjct: 98 catgcactgcctcttccctggc 119
