miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2
subunit beta OS=Malus domestica PE=2 SV=2
Length = 271
Score = 62.4 bits (150), Expect = 8e-10
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3
Query: 3 GDAGEEDLDDHAREDENGEGADLQQPRFPWDGTDRDYDYEELLGRVF 143
GDA EDL++ EDE GEG L+ P +PW+G+DRDY YEELL RVF
Sbjct: 82 GDA-VEDLNERTGEDEEGEGIVLETPSYPWEGSDRDYTYEELLDRVF 127
>sp|O24473|IF2B_WHEAT Eukaryotic translation initiation factor 2
subunit beta OS=Triticum aestivum PE=1 SV=1
Length = 270
Score = 60.1 bits (144), Expect = 4e-09
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 12 GEEDLDDHAREDENGEGADLQ-QPRFPWDGTDRDYDYEELLGRVF 143
GE+ LDD EDE GEG L ++PW+GTDRDY Y+ELLGRVF
Sbjct: 82 GEDTLDDQVGEDEQGEGIVLGGATQYPWEGTDRDYKYDELLGRVF 126
>sp|Q41969|IF2B_ARATH Eukaryotic translation initiation factor 2
subunit beta OS=Arabidopsis thaliana GN=EMB1401 PE=2
SV=3
Length = 268
Score = 57.8 bits (138), Expect = 2e-08
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = +3
Query: 6 DAGEEDLDDHAREDENGEGADLQQPRFPWDGTDRDYDYEELLGRVF 143
DAGE DLD+ A +++ GE + Q R+PW+G++RDY Y+ELLGRVF
Sbjct: 82 DAGE-DLDEIANDEQEGEEGIVLQQRYPWEGSERDYIYDELLGRVF 126
