miRNEST 2.0, an integrative microRNA resource :: BLAST
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 145 bits (73), Expect = 8e-36
Identities = 92/97 (94%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 11 aggattcctacaggagcgacctggaat-acatgtgggctccaccctcctgggttctcttg 69
||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||
Sbjct: 1 aggattcctacaggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttg 60
Query: 70 ggcaacatgtgttctcaggtcgcccctgccgggcttt 106
||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcaacatgtgttctcaggtcgcccctgccgggcttt 97
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgccgggctt 105
|||||||||||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccctgccgggctt 84
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 76 atgtgttctcaggtcgcccctgccgggctttcct 109
||||||||||||||||||||||| ||||||||||
Sbjct: 84 atgtgttctcaggtcgcccctgcagggctttcct 117
>40382_rco-MIR398b:mirbase
Length = 126
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgccggg 102
||||||||||||||||||||||||||||
Sbjct: 99 catgtgttctcaggtcgcccctgccggg 126
>42040_osa-MIR398b:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcgcccctgccggg 102
||||||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgccggg 83
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgc 98
||||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctgc 79
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgc 98
||||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctgc 79
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgc 98
||||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgc 98
||||||||||||||||||||||||
Sbjct: 60 catgtgttctcaggtcgcccctgc 83
>41801_bdi-MIR398c:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctg 97
|||||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccctg 107
>41799_bdi-MIR398a:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctg 97
|||||||||||||||||||||||
Sbjct: 94 catgtgttctcaggtcgcccctg 116
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcgcccctgc 98
||||||||||||||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgc 83
>42818_zma-MIR398b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccc 95
|||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccc 105
>42817_zma-MIR398a:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccc 95
|||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137
>42645_tae-MIR398:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccc 95
|||||||||||||||||||||
Sbjct: 83 catgtgttctcaggtcgcccc 103
>42588_sbi-MIR398:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccc 95
|||||||||||||||||||||
Sbjct: 86 catgtgttctcaggtcgcccc 106
>39882_aly-MIR398b:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 74 acatgtgttctcaggtcgcccctgc 98
||||||||||||||||| |||||||
Sbjct: 88 acatgtgttctcaggtcacccctgc 112
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgc 98
|||||||||||||||| |||||||
Sbjct: 83 catgtgttctcaggtcacccctgc 106
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 catgtgttctcaggtcgcccctgc 98
|||||||||||||||| |||||||
Sbjct: 84 catgtgttctcaggtcacccctgc 107
