miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 321 bits (162), Expect = 1e-88
Identities = 179/187 (95%)
Strand = Plus / Plus
Query: 12 gattgtggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 60
Query: 72 tgagctatgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgca 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagctatgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgca 120
Query: 132 tatctcaggagctttattacctaatgttagatcnnnnnnnggattgaagggagctctaaa 191
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 tatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaaa 180
Query: 192 cctttga 198
|||||||
Sbjct: 181 cctttga 187
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 103 bits (52), Expect = 5e-23
Identities = 146/176 (82%), Gaps = 4/176 (2%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagct 77
|||||||||||||||||||||||||||| | || |||||||||||| ||||||| ||||
Sbjct: 2 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 61
Query: 78 atgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctc 137
||| |||| |||| |||||| |||| | ||| || |||||||||||||||||
Sbjct: 62 atggatcc-acagtcctatct--atcaaccgaag-gataggtttgcggcttgcatatctc 117
Query: 138 aggagctttattacctaatgttagatcnnnnnnnggattgaagggagctctaaacc 193
|||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 118 aggagctttattgcctaatgttagatccctttttggattgaagggagctctaaacc 173
>51604_ptc-miR159c:pmrd
Length = 183
Score = 103 bits (52), Expect = 5e-23
Identities = 146/176 (82%), Gaps = 4/176 (2%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagct 77
|||||||||||||||||||||||||||| | || |||||||||||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 78 atgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctc 137
||| |||| |||| |||||| |||| | ||| || |||||||||||||||||
Sbjct: 67 atggatcc-acagtcctatct--atcaaccgaag-gataggtttgcggcttgcatatctc 122
Query: 138 aggagctttattacctaatgttagatcnnnnnnnggattgaagggagctctaaacc 193
|||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 123 aggagctttattgcctaatgttagatccctttttggattgaagggagctctaaacc 178
>51602_ptc-miR159a:pmrd
Length = 183
Score = 103 bits (52), Expect = 5e-23
Identities = 146/176 (82%), Gaps = 4/176 (2%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagct 77
|||||||||||||||||||||||||||| | || |||||||||||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 78 atgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctc 137
||| |||| |||| |||||| |||| | ||| || |||||||||||||||||
Sbjct: 67 atggatcc-acagtcctatct--atcaa-ctgaaggataggtttgcggcttgcatatctc 122
Query: 138 aggagctttattacctaatgttagatcnnnnnnnggattgaagggagctctaaacc 193
|||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 123 aggagctttattgcctaatgttagatccctttttggattgaagggagctctaaacc 178
>54777_vvi-miR159c:pmrd
Length = 190
Score = 97.6 bits (49), Expect = 3e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 17 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 76
||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
Query: 77 tatgaatcccacagccctatc 97
|||| ||||||||||||||||
Sbjct: 64 tatggatcccacagccctatc 84
>54378_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aatcccacag 90
|||||||||
Sbjct: 61 gatcccacag 70
>54377_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aatcccacag 90
|||||||||
Sbjct: 61 gatcccacag 70
>48539_gma-miR159a:pmrd
Length = 214
Score = 63.9 bits (32), Expect = 5e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 11 ggattgtggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctg 70
||||| || ||||||||||||||||||||||| || | || | |||||| || ||||||
Sbjct: 10 ggattatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctg 69
Query: 71 ctgagctatgaatcccacag 90
|| ||||||| |||||||||
Sbjct: 70 cttagctatggatcccacag 89
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 127 ttgcatatctcaggagcttta 147
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaa 41
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
