miRNEST 2.0, an integrative microRNA resource :: BLAST
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 198 bits (100), Expect = 7e-52
Identities = 107/108 (99%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 10 tgggaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagc 69
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggaagacact-ggaggcagcggttcatcgatctcttcctggccaattttttgtttagc 59
Query: 70 acgaaaaacatgaaccgatcgataaacctctgcatccagcgcttcctt 117
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 acgaaaaacatgaaccgatcgataaacctctgcatccagcgcttcctt 107
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 109 bits (55), Expect = 5e-25
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 13 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 72
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 4 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 62
Query: 73 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 115
|| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 63 aacaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 109 bits (55), Expect = 5e-25
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 13 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 72
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 4 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 62
Query: 73 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 115
|| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 63 aacaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 65.9 bits (33), Expect = 7e-12
Identities = 87/102 (85%), Gaps = 6/102 (5%)
Strand = Plus / Plus
Query: 14 aagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtt----tagc 69
|||||||| ||||||||||||||||||||||||||||| | ||| |||| || |
Sbjct: 18 aagacact-ggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataac 76
Query: 70 acgaaaaacatgaaccgatcgataaacctctgcatccagcgc 111
|| ||| ||||||| |||||||||||||||||||||||||||
Sbjct: 77 ac-aaatacatgaatcgatcgataaacctctgcatccagcgc 117
>40437_gma-MIR162:mirbase
Length = 102
Score = 65.9 bits (33), Expect = 7e-12
Identities = 73/86 (84%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 27 gcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatgaaccg 86
||||||||||||||||||||||||| | | ||||||| || | || |||||| ||
Sbjct: 16 gcagcggttcatcgatctcttcctg----aatcgttgtttaacatcagaaccatgaatcg 71
Query: 87 atcgataaacctctgcatccagcgct 112
||||||||||||||||||||||||||
Sbjct: 72 atcgataaacctctgcatccagcgct 97
>39813_aly-MIR162b:mirbase
Length = 184
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 73 aaaaacatgaaccgatcgataaacctctgcatccagcgctt 113
|||| |||||| |||||||||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatccagcgctt 138
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 77 acatgaaccgatcgataaacctctgcatccagcgct 112
||||||| ||||||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatccagcgct 185
>40342_rco-MIR162:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 78 catgaaccgatcgataaacctctgcatccagcgctt 113
|||||| |||||||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatccagcgctt 101
>41090_tcc-MIR162:mirbase
Length = 131
Score = 61.9 bits (31), Expect = 1e-10
Identities = 38/39 (97%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 14 aagacactnggaggcagcggttcatcgatctcttcctgg 52
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 15 aagacact-ggaggcagcggttcatcgatctcttcctgg 52
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 76 aacatgaaccgatcgataaacctctgcatccagcg 110
|||||||| ||||||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatccagcg 102
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 23 ggaggcagcggttcatcgatctcttcctgg 52
||||||||||||||||||||||||||||||
Sbjct: 15 ggaggcagcggttcatcgatctcttcctgg 44
>40663_mtr-MIR162:mirbase
Length = 124
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 75 aaacatgaaccgatcgataaacctctgcatccagcgct 112
||||||||| || |||||||||||||||||||||||||
Sbjct: 74 aaacatgaatcggtcgataaacctctgcatccagcgct 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 23 ggaggcagcggttcatcgatctcttcctgg 52
||||||||||||||||||||||||||||||
Sbjct: 70 ggaggcagcggttcatcgatctcttcctgg 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 aaaaacatgaaccgatcgataaacctctgcatccagcg 110
|||| |||||| |||||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccagcg 158
>40024_ath-MIR162a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
|||||||||||||||||||||||||||||
Sbjct: 27 ggaggcagcggttcatcgatctcttcctg 55
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 aaaaacatgaaccgatcgataaacctctgcatccagcg 110
|||| |||||| |||||||||||||||||||||||||
Sbjct: 74 aaaagcatgaatagatcgataaacctctgcatccagcg 111
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 cgatcgataaacctctgcatccagcgct 112
||||||||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatccagcgct 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 ggaggcagcggttcatcgatc 43
|||||||||||||||||||||
Sbjct: 14 ggaggcagcggttcatcgatc 34
>41578_vvi-MIR162:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 27 gcagcggttcatcgatctcttcctg 51
|||||||||||||||||||||||||
Sbjct: 15 gcagcggttcatcgatctcttcctg 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 tcgataaacctctgcatccagcg 110
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 cgatcgataaacctctgcatccag 108
||||||||||||||||||||||||
Sbjct: 104 cgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 cgatcgataaacctctgcatccag 108
||||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 cgatcgataaacctctgcatcc 106
||||||||||||||||||||||
Sbjct: 108 cgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 tcgataaacctctgcatccag 108
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 tcgataaacctctgcatccag 108
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 cgatcgataaacctctgcatccag 108
|||||||||| |||||||||||||
Sbjct: 101 cgatcgataagcctctgcatccag 124
