miRNEST 2.0, an integrative microRNA resource :: BLAST
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 244 bits (123), Expect = 2e-65
Identities = 151/162 (93%), Gaps = 2/162 (1%)
Strand = Plus / Plus
Query: 15 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 75 tcgacatgactggttgttgtggaaaaagaaaaggaaggaaataggnnnnnnnnnncaaag 134
||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 61 tcgacatgactggttgttgtggaaaaagaaaaggaaggaaacagg--aaaaaaaacaaag 118
Query: 135 aatagcgaattggatcccgccttgcatcaactgaatcggagg 176
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aatagcgaattggatcccgccttgcatcaactgaatcggagg 160
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 113 bits (57), Expect = 5e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 15 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 74
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 75 t 75
|
Sbjct: 61 t 61
Score = 69.9 bits (35), Expect = 7e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 141 gaattggatcccgccttgcatcaactgaatcggag 175
|||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135
>40448_gma-MIR168:mirbase
Length = 125
Score = 93.7 bits (47), Expect = 5e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 140 cgaattggatcccgccttgcatcaactgaatcggaggccgcggtgaa 186
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 13 gcggtctctgattcgcttggtgcaggtcgggaac 46
||||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>41101_tcc-MIR168:mirbase
Length = 167
Score = 83.8 bits (42), Expect = 4e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 140 cgaattggatcccgccttgcatcaactgaatcggaggccgcggtga 185
|||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtga 162
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctgattcgcttggtgcaggtcgggaactgatt 51
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
>41215_crt-MIR168:mirbase
Length = 201
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctgattcgcttggtgcaggtcgggaactgatt 51
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
Score = 77.8 bits (39), Expect = 3e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 139 gcgaattggatcccgccttgcatcaactgaatcggaggccgcggtga 185
||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggagaccgaggtga 178
>41210_ccl-MIR168:mirbase
Length = 176
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctgattcgcttggtgcaggtcgggaactgatt 51
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 46
Score = 75.8 bits (38), Expect = 1e-14
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 139 gcgaattggatcccgccttgcatcaactgaatcggaggccgcggtg 184
||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggagaccgaggtg 176
>40044_ath-MIR168b:mirbase
Length = 124
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctgattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 149 tcccgccttgcatcaactgaatcggaggccgcggtga 185
||||| |||| |||||||||||||||| ||| |||||
Sbjct: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
>39833_aly-MIR168b:mirbase
Length = 176
Score = 81.8 bits (41), Expect = 2e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctgattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 25 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 69
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 147 gatcccgccttgcatcaactgaatcggaggccgcggtgaa 186
||||||| |||| |||||||||||||||| ||| ||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggagtccgaggtgaa 149
>40271_bna-MIR168:mirbase
Length = 133
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 cggcggtctctgattcgcttggtgcaggtcgggaactgatt 51
|||||| |||||| |||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44
>40355_rco-MIR168:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 141 gaattggatcccgccttgcatcaactgaatcg 172
||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcg 128
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgatt 32
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 143 attggatcccgccttgcatcaactgaatcgga 174
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 22 gattcgcttggtgcaggtcgggaactgattcggc 55
||||||||||||||||||||||||| |||||||
Sbjct: 15 gattcgcttggtgcaggtcgggaaccaattcggc 48
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 143 attggatcccgccttgcatcaactgaatcgga 174
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 54.0 bits (27), Expect = 4e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 9 accggcggtctctgattcgcttggtgcaggtcgggaactgattcggc 55
|||| ||| ||| ||||||||||||||||||||||||| |||||||
Sbjct: 8 accgtcgggctcggattcgcttggtgcaggtcgggaaccaattcggc 54
>41596_vvi-MIR168:mirbase
Length = 132
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 147 gatcccgccttgcatcaactgaatcggag 175
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 15 ggtctctgattcgcttggtgcaggtcgggaac 46
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 ggatcccgccttgcatcaactgaatcggag 175
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
