miRNEST 2.0, an integrative microRNA resource :: BLAST
>53122_ptc-miRf11300-akr:pmrd
Length = 144
Score = 147 bits (74), Expect = 3e-36
Identities = 125/141 (88%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaag--agaatatt 70
||||||| ||| ||||||||||||||| | |||| |||||||| |||||| | ||||||
Sbjct: 2 gaaagtggtttcccggaaaccactttccggaaaacaaacacagtcaaaaggaaaaatatt 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| |||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 62 ttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgaccggaaag 121
Query: 131 tgttttccgttgaccaccttt 151
|||||||||||||||| ||||
Sbjct: 122 tgttttccgttgaccaacttt 142
>52523_ptc-miRf10701-akr:pmrd
Length = 144
Score = 147 bits (74), Expect = 3e-36
Identities = 125/141 (88%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaag--agaatatt 70
||||||| ||| ||||||||||||||| | |||| |||||||| |||||| | ||||||
Sbjct: 2 gaaagtggtttcccggaaaccactttccggaaaacaaacacagtcaaaaggaaaaatatt 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| |||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 62 ttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgaccggaaag 121
Query: 131 tgttttccgttgaccaccttt 151
|||||||||||||||| ||||
Sbjct: 122 tgttttccgttgaccaacttt 142
>52053_ptc-miRf10231-akr:pmrd
Length = 144
Score = 147 bits (74), Expect = 3e-36
Identities = 125/141 (88%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaag--agaatatt 70
||||||| ||| ||||||||||||||| | |||| |||||||| |||||| | ||||||
Sbjct: 2 gaaagtggtttcccggaaaccactttccggaaaacaaacacagtcaaaaggaaaaatatt 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| |||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 62 ttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgaccggaaag 121
Query: 131 tgttttccgttgaccaccttt 151
|||||||||||||||| ||||
Sbjct: 122 tgttttccgttgaccaacttt 142
>52110_ptc-miRf10288-akr:pmrd
Length = 131
Score = 145 bits (73), Expect = 1e-35
Identities = 112/124 (90%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 25 ccggaaaccactttctgaaaaataaacacagccaaaag--agaatattttcttggaaacc 82
||||||||||||||| | |||| ||||||||||||||| | ||||||||| | ||||||
Sbjct: 8 ccggaaaccactttccggaaaacaaacacagccaaaaggaaaaatattttcctagaaacc 67
Query: 83 aagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtgttttccgttg 142
|| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 68 aaaccaaatttttctttgactggaaagtgtttttcgttgaccggaaagtgttttccgttg 127
Query: 143 acca 146
||||
Sbjct: 128 acca 131
>52140_ptc-miRf10318-akr:pmrd
Length = 144
Score = 139 bits (70), Expect = 7e-34
Identities = 124/141 (87%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaata--tt 70
||||||| ||| ||| ||||||||||| | |||| ||||||||||||||| ||| | ||
Sbjct: 2 gaaagtggtttcccgaaaaccactttccggaaaacaaacacagccaaaagggaaaacatt 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 62 ttcctggaaaccaaaccaaatttttctttgactggaaagtgttttccgttgaccggaaag 121
Query: 131 tgttttccgttgaccaccttt 151
|||||||||||||||| ||||
Sbjct: 122 tgttttccgttgaccaacttt 142
>52524_ptc-miRf10702-akr:pmrd
Length = 131
Score = 137 bits (69), Expect = 3e-33
Identities = 111/124 (89%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 25 ccggaaaccactttctgaaaaataaacacagccaaaag--agaatattttcttggaaacc 82
||||||||||||||| | |||| |||||||| |||||| | ||||||||| ||||||||
Sbjct: 8 ccggaaaccactttccggaaaacaaacacagtcaaaaggaaaaatattttcctggaaacc 67
Query: 83 aagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtgttttccgttg 142
|| |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 68 aaaccaaatttttctttgactgaaaagtgtttttcgttgaccggaaagtgttttccgttg 127
Query: 143 acca 146
||||
Sbjct: 128 acca 131
>52052_ptc-miRf10230-akr:pmrd
Length = 131
Score = 137 bits (69), Expect = 3e-33
Identities = 111/124 (89%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 25 ccggaaaccactttctgaaaaataaacacagccaaaag--agaatattttcttggaaacc 82
||||||||||||||| | |||| |||||||| |||||| | ||||||||| ||||||||
Sbjct: 8 ccggaaaccactttccggaaaacaaacacagtcaaaaggaaaaatattttcctggaaacc 67
Query: 83 aagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtgttttccgttg 142
|| |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 68 aaaccaaatttttctttgactgaaaagtgtttttcgttgaccggaaagtgttttccgttg 127
Query: 143 acca 146
||||
Sbjct: 128 acca 131
>53153_ptc-miRf11331-akr:pmrd
Length = 143
Score = 121 bits (61), Expect = 2e-28
Identities = 119/136 (87%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaa--tatt 70
||||||| ||| ||||||||||||||| | |||| ||||||||||||||| ||| ||||
Sbjct: 142 gaaagtggtttcccggaaaccactttccggaaaacaaacacagccaaaagggaaaatatt 83
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct: 82 ttcctggaaaccaaaccaaatttttctttgactggaaagtgttttctgttgaccggaaag 23
Query: 131 tgttttccgttgacca 146
| |||||||||||||
Sbjct: 22 t-atttccgttgacca 8
>52395_ptc-miRf10573-akr:pmrd
Length = 166
Score = 121 bits (61), Expect = 2e-28
Identities = 119/136 (87%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaatat--t 70
||||||| ||| ||||||||||||||| | |||| ||||||||||||||| ||| | |
Sbjct: 2 gaaagtggtttcccggaaaccactttccggaaaacaaacacagccaaaagggaaaacact 61
Query: 71 ttcttggaaaccaagtcaaatttttcttt-gactggaaagtgtttttcgttaaccagaaa 129
||| || ||||||||||||||||| |||| |||||||||||||||| |||||||||||||
Sbjct: 62 ttcctgaaaaccaagtcaaattttccttttgactggaaagtgttttccgttaaccagaaa 121
Query: 130 gtgttttccgttgacc 145
||||||| | ||||||
Sbjct: 122 gtgtttttctttgacc 137
Score = 69.9 bits (35), Expect = 6e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 105 gaaagtgtttttcgttaaccagaaagtgttttccgttgaccaccttt 151
||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 118 gaaagtgtttttctttgaccggaaagtgttttccgttgaccaccttt 164
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 91 tttttctttgactggaaagtgtttttcgttaacca 125
|||||||||||| |||||||||||| |||| ||||
Sbjct: 125 tttttctttgaccggaaagtgttttccgttgacca 159
>52319_ptc-miRf10497-akr:pmrd
Length = 138
Score = 117 bits (59), Expect = 3e-27
Identities = 116/134 (86%), Gaps = 2/134 (1%)
Strand = Plus / Minus
Query: 15 aagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaata--tttt 72
||||| ||| ||||||||||||||| | |||| |||||| | |||||| ||| | ||||
Sbjct: 138 aagtggtttcccggaaaccactttccggaaaacaaacaccgtcaaaagggaaaacatttt 79
Query: 73 cttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtg 132
|||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||
Sbjct: 78 tctggaaaccaaaccaaatttttctttgactggaaagtgttttccgttgaccggaaagtg 19
Query: 133 ttttccgttgacca 146
||||||||||||||
Sbjct: 18 ttttccgttgacca 5
>51859_ptc-miRf10037-akr:pmrd
Length = 133
Score = 115 bits (58), Expect = 1e-26
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 25 ccggaaaccactttctgaaaaataaacacagccaaaagagaatat--tttcttggaaacc 82
||||||||||||||| | |||| ||||| ||||||||| ||| | |||| | |||| |
Sbjct: 9 ccggaaaccactttccggaaaacaaacatagccaaaagggaaaacactttccttgaaatc 68
Query: 83 aagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtgttttccgttg 142
|||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 69 aagtcaaatttttctttgactgaaaagtgtttttcgttgaccggaaagtgttttccgttg 128
Query: 143 a 143
|
Sbjct: 129 a 129
>51908_ptc-miRf10086-akr:pmrd
Length = 164
Score = 111 bits (56), Expect = 2e-25
Identities = 110/127 (86%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaata--tt 70
||||||| ||| ||||||||||||||| | |||| ||||||||||||||| ||| | ||
Sbjct: 2 gaaagtggtttcccggaaaccactttccggaaaacaaacacagccaaaagggaaaacatt 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| ||||||||| ||||||||||||||||||| |||| ||| |||||
Sbjct: 62 ttcctggaaaccaaaccaaatttttttttgactggaaagtgttttccgttgaccggaaag 121
Query: 131 tgttttc 137
| |||||
Sbjct: 122 tattttc 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 ttttctttgactggaaagtgtttttcgttaacca 125
||||| |||||||||||||||||| |||| ||||
Sbjct: 124 ttttcgttgactggaaagtgttttccgttgacca 157
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgacc 145
||||||||||||||||||||
Sbjct: 96 gaaagtgttttccgttgacc 115
>53759_ptc-miRf11937-akr:pmrd
Length = 149
Score = 107 bits (54), Expect = 3e-24
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 10 ttagaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaatat 69
|||||||||| ||| ||| ||||||||||| | |||| ||||| ||||||||||||| |
Sbjct: 1 ttagaaagtggtttcccgaaaaccactttccggaaaacaaacatagccaaaagagaaaac 60
Query: 70 --tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccaga 127
|||| || ||||||| ||||||||| ||| | ||||||||||||| ||| ||| ||
Sbjct: 61 actttcctgaaaaccaaaccaaatttttttttaattggaaagtgttttctgttgaccgga 120
Query: 128 aagtgttttccgttgaccaccttttctaa 156
||||||||||||||||||| |||||||||
Sbjct: 121 aagtgttttccgttgaccaacttttctaa 149
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 13 gaaagtgattttccggaaaccactttct 40
||||||| ||||| ||||||||||||||
Sbjct: 30 gaaagtggttttcgggaaaccactttct 3
>54076_ptc-miRf12254-akr:pmrd
Length = 151
Score = 105 bits (53), Expect = 1e-23
Identities = 129/152 (84%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 8 gtttagaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaat 67
|||| ||||||| ||| ||||||| ||||||| | |||| ||| ||||||||||| |||
Sbjct: 1 gtttggaaagtggtttcccggaaatcactttccggaaaacaaatacagccaaaagggaaa 60
Query: 68 at--tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
| |||| |||||||||| |||| |||| ||||||||||||||||||| |||| |||
Sbjct: 61 acactttcctggaaaccaaaccaaaattttttttgactggaaagtgttttccgttgaccg 120
Query: 126 gaaagtgttttccgttgaccaccttttctaat 157
||||||| ||||||||||||| ||||||||||
Sbjct: 121 gaaagtg-tttccgttgaccaacttttctaat 151
>51914_ptc-miRf10092-akr:pmrd
Length = 157
Score = 101 bits (51), Expect = 2e-22
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 75 tggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtgtt 134
|||||||||||||||||||| |||||||||||||||||||| |||| | | |||||||||
Sbjct: 20 tggaaaccaagtcaaatttt-ctttgactggaaagtgttttccgttgatcggaaagtgtt 78
Query: 135 ttccgttgaccaccttttctaatggca 161
|| | ||||||| ||||||||||||||
Sbjct: 79 tttcattgaccaacttttctaatggca 105
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 4 gaaagtttagaaagtgattttccggaaaccactttc 39
|||||||| ||||||| ||| | |||||||||||||
Sbjct: 117 gaaagtttggaaagtggtttcctggaaaccactttc 152
>51961_ptc-miRf10139-akr:pmrd
Length = 144
Score = 99.6 bits (50), Expect = 6e-22
Identities = 119/141 (84%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaatat--t 70
||||||| ||| | ||||||||||||| | |||| ||||||||| ||||| ||| | |
Sbjct: 2 gaaagtggtttccgggaaaccactttccggaaaacaaacacagctaaaagggaaaacact 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| ||||| | || |||||| |||||||||||||||||||||| |||| ||| |||||
Sbjct: 62 ttcctggaatctaaaccaaattgttctttgactggaaagtgttttccgttgaccggaaag 121
Query: 131 tgttttccgttgaccaccttt 151
|||||||||||||||| ||||
Sbjct: 122 tgttttccgttgaccaacttt 142
>51902_ptc-miRf10080-akr:pmrd
Length = 178
Score = 97.6 bits (49), Expect = 2e-21
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 20 attttccggaaaccactttctgaaaaataaacacagccaaaa--gagaatattttcttgg 77
|||| ||||||||||||||| | |||| |||||||||||||| || || |||||| ||
Sbjct: 178 atttcccggaaaccactttccggaaaacaaacacagccaaaaaggaaaacattttcctga 119
Query: 78 aaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||||||| |||||||||||||||||| |||||||||| |||| ||||
Sbjct: 118 aaaccaagccaaatttttctttgactgaaaagtgttttccgttgacca 71
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 127 aaagtgttttccgttgaccaccttttctaatggca 161
|||||||||||||||||||| ||||| ||||||||
Sbjct: 90 aaagtgttttccgttgaccaacttttttaatggca 56
>54077_ptc-miRf12255-akr:pmrd
Length = 143
Score = 95.6 bits (48), Expect = 1e-20
Identities = 121/143 (84%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaagagaatat--t 70
||||||| ||| ||||||| ||||||| | |||| ||| ||||||||||| ||| | |
Sbjct: 2 gaaagtggtttcccggaaatcactttccggaaaacaaatacagccaaaagggaaaacact 61
Query: 71 ttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaag 130
||| |||||||||| |||| |||| ||||||||||||||||||| |||| ||| |||||
Sbjct: 62 ttcctggaaaccaaaccaaaattttttttgactggaaagtgttttccgttgaccggaaag 121
Query: 131 tgttttccgttgaccaccttttc 153
|| ||||||||||||| ||||||
Sbjct: 122 tg-tttccgttgaccaacttttc 143
>51880_ptc-miRf10058-akr:pmrd
Length = 151
Score = 87.7 bits (44), Expect = 2e-18
Identities = 105/123 (85%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 25 ccggaaaccactttctgaaaaataaacacagccaaaa--gagaatattttcttggaaacc 82
||||||||||||||| | |||| |||||||||||||| || || | |||| | |||| |
Sbjct: 8 ccggaaaccactttccggaaaacaaacacagccaaaaaggaaaacactttcctagaaatc 67
Query: 83 aagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaagtgttttccgttg 142
|| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||
Sbjct: 68 aaaccaaatttttctttgactggaaagtgttttccgttgaccgaaaagtg-tttccgttg 126
Query: 143 acc 145
|||
Sbjct: 127 acc 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 117 cgttaaccagaaagtgttttccgttgacca 146
|||| ||| |||||||||||||||||||||
Sbjct: 122 cgttgaccggaaagtgttttccgttgacca 151
>52983_ptc-miRf11161-akr:pmrd
Length = 114
Score = 81.8 bits (41), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 gtgtttttcgttaaccagaaagtgttttccgttgaccaccttttctaatggca 161
|||||||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtgtttttcgttgaccggaaagtgttttccgttgaccacctttcctaatggca 53
>51977_ptc-miRf10155-akr:pmrd
Length = 140
Score = 79.8 bits (40), Expect = 6e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 16 tttcctggaaaccaagccaaatttttctttgactggaaagtgttttccgttgacca 71
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||||||||||||||
Sbjct: 51 gaaagtgttttccgttgaccaacttttctaatggca 86
>53744_ptc-miRf11922-akr:pmrd
Length = 128
Score = 77.8 bits (39), Expect = 2e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgtt 120
|||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 10 tttcctggaaaccaagccaaatttttctttgactggaaagtatttttcgtt 60
>52890_ptc-miRf11068-akr:pmrd
Length = 92
Score = 77.8 bits (39), Expect = 2e-15
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaaccagaaa 129
|||| ||||| ||||| |||||||| |||| |||||||||| ||||| ||| ||||||||
Sbjct: 18 tttcctggaacccaagccaaattttcctttaactggaaagtattttttgttgaccagaaa 77
Query: 130 gtgttttccgttgac 144
||||||||| |||||
Sbjct: 78 gtgttttcctttgac 92
>52458_ptc-miRf10636-akr:pmrd
Length = 138
Score = 75.8 bits (38), Expect = 9e-15
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 98 ttgactggaaagtgtttttcgttaaccagaaagtgttttccgttgaccaccttt 151
|||||| |||||||||||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 54 ttgactagaaagtgtttttcgttgaccggaaagtgttttccgttgaccaacttt 1
Score = 50.1 bits (25), Expect = 5e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 14 aaagtgattttccggaaaccactttctgaaaaataaacacagccaaaag 62
|||||| ||| ||||||| ||||||| | |||| |||||||||||||||
Sbjct: 138 aaagtggtttcccggaaatcactttccggaaaacaaacacagccaaaag 90
>53742_ptc-miRf11920-akr:pmrd
Length = 114
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 109 gtgtttttcgttaaccagaaagtgttttccgttgaccaccttttctaatggca 161
|||||||||||| ||| ||||||||||||||||||||| |||| |||||||||
Sbjct: 1 gtgtttttcgttgaccggaaagtgttttccgttgaccaactttcctaatggca 53
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 4 gaaagtttagaaagtgattttccggaaaccactttc 39
|||||||||||||||| |||||||||||| ||||||
Sbjct: 65 gaaagtttagaaagtggttttccggaaactactttc 100
>52852_ptc-miRf11030-akr:pmrd
Length = 114
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 109 gtgtttttcgttaaccagaaagtgttttccgttgaccaccttttctaatggca 161
||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggca 53
>53949_ptc-miRf12127-akr:pmrd
Length = 128
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| |||||||||||||||||| |||||||||| |||| ||||
Sbjct: 10 tttcctggaaaccaagccaaatttttctttgactgaaaagtgttttccgttgacca 65
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 127 aaagtgttttccgttgaccaccttttctaatggca 161
|||||||||||||||||||| |||||||| |||||
Sbjct: 46 aaagtgttttccgttgaccaacttttctagtggca 80
>53871_ptc-miRf12049-akr:pmrd
Length = 140
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacca 71
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||||||||||||||
Sbjct: 51 gaaagtgttttccgttgaccaacttttctaatggca 86
>53870_ptc-miRf12048-akr:pmrd
Length = 140
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacca 71
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||||||||||||||
Sbjct: 51 gaaagtgttttccgttgaccaacttttctaatggca 86
>52389_ptc-miRf10567-akr:pmrd
Length = 140
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacca 71
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||||||||||||||
Sbjct: 51 gaaagtgttttccgttgaccaacttttctaatggca 86
>52118_ptc-miRf10296-akr:pmrd
Length = 140
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacca 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| |||| ||| |||||
Sbjct: 51 gaaagtgttttccgttgaccaactttcctagtggca 86
>54345_ptc-miRf12523-akr:pmrd
Length = 231
Score = 63.9 bits (32), Expect = 3e-11
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| |||||| |||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 136 tttcctggaaatcaagccaaattttcctttgactggaaagtgttttccgttgacca 81
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
||||||||||||||||||||| |||||| ||||
Sbjct: 101 gaaagtgttttccgttgaccaacttttcaaatg 69
>52589_ptc-miRf10767-akr:pmrd
Length = 155
Score = 63.9 bits (32), Expect = 3e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
|||| ||||||||||| ||||||| |||||||||||||||||||| |||| ||||
Sbjct: 23 tttcctggaaaccaagctaaattttcctttgactggaaagtgttttccgttgacca 78
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||||||||||||||
Sbjct: 58 gaaagtgttttccgttgaccaacttttctaatggca 93
>53899_ptc-miRf12077-akr:pmrd
Length = 126
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 75 tggaaaccaagtcaaatttttctttgactggaaagtgtttttcgttaacca 125
||||||| ||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 14 tggaaacgaagccaaattttcctttgactagaaagtgtttttcgttgacca 64
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 125 agaaagtgttttccgttgaccaccttttctaatg 158
|||||||||||| ||||||||| |||||||||||
Sbjct: 43 agaaagtgtttttcgttgaccaacttttctaatg 76
>54212_ptc-miRf12390-akr:pmrd
Length = 141
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttt 115
|||| ||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 17 tttcctggaaaccaagccaaattttcctttgattggaaagtgtttt 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
||||||||||||| ||||||| |||| ||||||
Sbjct: 52 gaaagtgttttccattgaccaactttcctaatg 84
>53446_ptc-miRf11624-akr:pmrd
Length = 137
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgtttt 115
|||| ||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 123 tttcctggaaaccaagccaaattttcctttgattggaaagtgtttt 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
||||||||||||| ||||||| |||| ||||||
Sbjct: 88 gaaagtgttttccattgaccaactttcctaatg 56
>53991_ptc-miRf12169-akr:pmrd
Length = 97
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
|||||||||||||||||||||||||| ||||||
Sbjct: 8 gaaagtgttttccgttgaccacctttcctaatg 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 98 ttgactggaaagtgtttttcgttaacca 125
|||||||||||||||||| |||| ||||
Sbjct: 1 ttgactggaaagtgttttccgttgacca 28
>52909_ptc-miRf11087-akr:pmrd
Length = 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 88 aaatttttctttgactggaaagtgtttttcgtt 120
|||||||||||||||||||||||||||| ||||
Sbjct: 2 aaatttttctttgactggaaagtgttttccgtt 34
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 88 aaatttttctttgactggaaagtgtttt 115
||||||||||||||||||||||||||||
Sbjct: 114 aaatttttctttgactggaaagtgtttt 87
>52002_ptc-miRf10180-akr:pmrd
Length = 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgactggaaagtgttt 114
|||| |||||||||| ||||||||||||||||| ||||||||||
Sbjct: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
>53786_ptc-miRf11964-akr:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
|||||||||||| |||||||| |||||||||||
Sbjct: 9 gaaagtgttttctgttgaccaacttttctaatg 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 4 gaaagtttagaaagtgattttccggaaaccactttc 39
|||||||| ||||||| ||| ||| |||||||||||
Sbjct: 56 gaaagtttggaaagtggtttcccgaaaaccactttc 91
>53785_ptc-miRf11963-akr:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
|||||||||||| |||||||| |||||||||||
Sbjct: 9 gaaagtgttttctgttgaccaacttttctaatg 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 4 gaaagtttagaaagtgattttccggaaaccactttc 39
|||||||| ||||||| ||| ||| |||||||||||
Sbjct: 56 gaaagtttggaaagtggtttcccgaaaaccactttc 91
>52487_ptc-miRf10665-akr:pmrd
Length = 152
Score = 50.1 bits (25), Expect = 5e-07
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 91 tttttctttgactggaaagtgtttttcgttaaccagaaagtgttttccgttgaccacctt 150
|||||| ||||| | ||||||||| |||| ||| ||||||||||||||||||||| |||
Sbjct: 92 tttttcgttgaccgaaaagtgtttc-cgttgaccggaaagtgttttccgttgaccaactt 150
Query: 151 t 151
|
Sbjct: 151 t 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaaaa 61
||||||| ||| | ||||| ||||||| | |||| ||||||||||||||
Sbjct: 1 gaaagtggtttcctggaaatcactttccggaaaacaaacacagccaaaa 49
Score = 40.1 bits (20), Expect = 5e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 106 aaagtgtttttcgttaaccagaaagtgttttccgttgacc 145
||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 86 aaagtgtttttcgttgaccgaaaagtg-tttccgttgacc 124
>53893_ptc-miRf12071-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
|||||||||||| |||||||| |||| |||||||||
Sbjct: 9 gaaagtgttttctgttgaccaactttcctaatggca 44
>53673_ptc-miRf11851-akr:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 126 gaaagtgttttccgttgaccaccttttctaat 157
||||||||||||||||||||| |||| |||||
Sbjct: 94 gaaagtgttttccgttgaccaactttcctaat 63
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1 catgaaagtttagaaagtgattttccggaaaccactttc 39
||||||||||| ||||||| ||| | |||||||||||||
Sbjct: 50 catgaaagtttggaaagtggtttacaggaaaccactttc 12
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 97 tttgactggaaagtgtttttcgttaacca 125
||||||||||||||||||| |||| ||||
Sbjct: 102 tttgactggaaagtgttttccgttgacca 74
>53306_ptc-miRf11484-akr:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| |||| |||| ||||
Sbjct: 8 gaaagtgttttccgttgaccaactttcctaaaggca 43
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 98 ttgactggaaagtgtttttcgttaacca 125
|||||||||||||||||| |||| ||||
Sbjct: 1 ttgactggaaagtgttttccgttgacca 28
>52895_ptc-miRf11073-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||| |||||||||
Sbjct: 10 gaaagtgttttccgttgaccaattttcctaatggca 45
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 4 gaaagtttagaaagtgattttccggaaaccactttc 39
|||||||||||||||| ||| ||| |||| ||||||
Sbjct: 57 gaaagtttagaaagtggtttcccgaaaacgactttc 92
>52894_ptc-miRf11072-akr:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttttctaatggca 161
||||||||||||||||||||| ||| |||||||||
Sbjct: 18 gaaagtgttttccgttgaccaattttcctaatggca 53
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 4 gaaagtttagaaagtgattttccggaaaccactttc 39
|||||||||||||||| ||| ||| |||| ||||||
Sbjct: 65 gaaagtttagaaagtggtttcccgaaaacgactttc 100
>53435_ptc-miRf11613-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaa 59
||||||| ||| ||| ||||||||||| | |||| ||||||||||||
Sbjct: 93 gaaagtggtttcccgaaaaccactttccggaaaacaaacacagccaa 47
>53280_ptc-miRf11458-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaa 59
||||||| ||| ||| ||||||||||| | |||| ||||||||||||
Sbjct: 93 gaaagtggtttcccgaaaaccactttccggaaaacaaacacagccaa 47
>52896_ptc-miRf11074-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1 catgaaagtttagaaagtgattttccggaaaccactttc 39
||||||||||||||||||| ||| | | |||||||||||
Sbjct: 50 catgaaagtttagaaagtggtttccagaaaaccactttc 12
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 126 gaaagtgttttccgttgaccaccttttctaatg 158
|||| ||||||| |||||||| |||||||||||
Sbjct: 94 gaaaatgttttctgttgaccaacttttctaatg 62
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 13 gaaagtgattttccggaaaccactttct 40
||||||| ||||| ||||||||||||||
Sbjct: 12 gaaagtggttttctggaaaccactttct 39
>52173_ptc-miRf10351-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaa 59
||||||| ||| ||| ||||||||||| | |||| ||||||||||||
Sbjct: 93 gaaagtggtttcccgaaaaccactttccggaaaacaaacacagccaa 47
>52119_ptc-miRf10297-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 13 gaaagtgattttccggaaaccactttctgaaaaataaacacagccaa 59
||||||| ||| ||| ||||||||||| | |||| ||||||||||||
Sbjct: 93 gaaagtggtttcccgaaaaccactttccggaaaacaaacacagccaa 47
>53301_ptc-miRf11479-akr:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 126 gaaagtgttttccgttgaccaccttt 151
||||||||||||||||||||| ||||
Sbjct: 25 gaaagtgttttccgttgaccaacttt 50
>52530_ptc-miRf10708-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 126 gaaagtgttttccgttgaccaccttt 151
||||||||||||||||||||| ||||
Sbjct: 91 gaaagtgttttccgttgaccaacttt 66
>52085_ptc-miRf10263-akr:pmrd
Length = 161
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 117 cgttaaccagaaagtgttttccgttgacca 146
|||| ||| |||||||||||||||||||||
Sbjct: 132 cgttgaccggaaagtgttttccgttgacca 161
Score = 40.1 bits (20), Expect = 5e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 98 ttgactggaaagtgtttttcgttaaccagaaagtgttttccgttgacc 145
|||||||||||||||||| |||| ||| ||||| ||||||||||||
Sbjct: 93 ttgactggaaagtgttttccgttgaccgagaagtg-tttccgttgacc 139
>51924_ptc-miRf10102-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 25 ccggaaaccactttctgaaaaataaacacagccaaaag 62
||||||| ||||||| | |||| |||||||||||||||
Sbjct: 8 ccggaaatcactttccggaaaacaaacacagccaaaag 45
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 cgttaaccagaaagtgttttccgttgacc 145
|||| ||| ||||||||||||||||||||
Sbjct: 91 cgttgaccggaaagtgttttccgttgacc 119
>53331_ptc-miRf11509-akr:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 70 tttcttggaaaccaagtcaaatttttctttgac 102
|||| ||||||||||| |||||||||| |||||
Sbjct: 10 tttcctggaaaccaagccaaatttttcgttgac 42
