miRNEST 2.0, an integrative microRNA resource :: BLAST
>41510_ptc-MIR530b:mirbase
Length = 172
Score = 268 bits (135), Expect = 2e-72
Identities = 171/186 (91%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 12 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 60
Query: 72 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatagagtg 131
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaa-------------- 106
Query: 132 ttagatatggaaactaataagcttagttgaggtgcaggtgcaggtgcaggtgaatgccat 191
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 107 ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccat 166
Query: 192 tttggt 197
||||||
Sbjct: 167 tttggt 172
>41509_ptc-MIR530a:mirbase
Length = 144
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 158 ttgaggtgcaggtgcaggtgcaggtgaatgccattttggt 197
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
Score = 63.9 bits (32), Expect = 5e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 gccaatatgttgcctttatctgcatttgcacctgca 47
||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgca 36
>41158_tcc-MIR530b:mirbase
Length = 178
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 160 gaggtgcaggtgcaggtgcaggtgaatgccattttgg 196
|||||||||| |||| |||||||||||||||||||||
Sbjct: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 18 atgttgcctttatctgcatttgcacctgca 47
|||| |||||||||||||||||||||||||
Sbjct: 7 atgtagcctttatctgcatttgcacctgca 36
>41263_csi-MIR530b:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 cctttatctgcatttgcacctgcatctt 51
||||||||||||||||||||||||||||
Sbjct: 3 cctttatctgcatttgcacctgcatctt 30
>41157_tcc-MIR530a:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tttatctgcatttgcacctgca 47
||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36
>41205_aqc-MIR530:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tctgcatttgcacctgcatct 50
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
