miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51746_ptc-miR398c:pmrd
          Length = 97

 Score =  184 bits (93), Expect = 1e-47
 Identities = 96/97 (98%)
 Strand = Plus / Plus

                                                                       
Query: 11  aggattcctacaggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttg 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aggattcctacaggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttg 60

                                                
Query: 71  ggcaacatgtgttctcaggtcgcccctgccgggcttt 107
            ||||||||||||||||||||||||||||||||||||
Sbjct: 61  agcaacatgtgttctcaggtcgcccctgccgggcttt 97




>51745_ptc-miR398b:pmrd
          Length = 85

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 76  catgtgttctcaggtcgcccctgccgggctt 106
           |||||||||||||||||||||||||||||||
Sbjct: 54  catgtgttctcaggtcgcccctgccgggctt 84




>48963_osa-miR398b:pmrd
          Length = 88

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 78  tgtgttctcaggtcgcccctgccggg 103
           ||||||||||||||||||||||||||
Sbjct: 58  tgtgttctcaggtcgcccctgccggg 83




>54876_vvi-miR398c:pmrd
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 76 catgtgttctcaggtcgcccctgc 99
          ||||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctgc 79




>54875_vvi-miR398b:pmrd
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 76 catgtgttctcaggtcgcccctgc 99
          ||||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctgc 79




>46890_aqc-miR398b:pmrd
          Length = 93

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 76 catgtgttctcaggtcgcccctgc 99
          ||||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93




>48749_mtr-miR398a:pmrd
          Length = 77

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 catgtgttctcaggtcgcccctg 98
          |||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77




>55090_zma-miR398c:pmrd
          Length = 108

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 76  catgtgttctcaggtcgcccc 96
           |||||||||||||||||||||
Sbjct: 86  catgtgttctcaggtcgcccc 106




>55089_zma-miR398b:pmrd
          Length = 142

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 76  catgtgttctcaggtcgcccc 96
           |||||||||||||||||||||
Sbjct: 119 catgtgttctcaggtcgcccc 139




>55088_zma-miR398a:pmrd
          Length = 142

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 catgtgttctcaggtcgcccc 96
          |||||||||||||||||||||
Sbjct: 24 catgtgttctcaggtcgcccc 4




>54744_tae-miR2025:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 76 catgtgttctcaggtcgcccc 96
          |||||||||||||||||||||
Sbjct: 69 catgtgttctcaggtcgcccc 89




>47014_ath-miR398c:pmrd
          Length = 115

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  catgtgttctcaggtcgcccctgc 99
           |||||||||||||||| |||||||
Sbjct: 83  catgtgttctcaggtcacccctgc 106




>47013_ath-miR398b:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  catgtgttctcaggtcgcccctgc 99
           |||||||||||||||| |||||||
Sbjct: 84  catgtgttctcaggtcacccctgc 107