miRNEST 2.0, an integrative microRNA resource :: BLAST
>41453_ptc-MIR399f:mirbase
Length = 101
Score = 192 bits (97), Expect = 4e-50
Identities = 100/101 (99%)
Strand = Plus / Minus
Query: 16 atcgaatggcagggcaattctcccttggcaaaacagaaatatgcaggcatttatttccat 75
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 101 atcgaatggcagggcaattctcctttggcaaaacagaaatatgcaggcatttatttccat 42
Query: 76 gttctgtttgccaaaggaggataaagccctgttattcttta 116
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gttctgtttgccaaaggaggataaagccctgttattcttta 1
>41675_vvi-MIR399h:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 18 cgaatggcagggcaattctcccttggcaaaacagaaatatgca 60
||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 87 cgaatggcagggcaattctcctttggcaaaacagaagtatgca 45
>41152_tcc-MIR399g:mirbase
Length = 112
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaaaacagaa 53
|||||||||||||||||||| ||||||||||||||
Sbjct: 98 gaatggcagggcaattctcctttggcaaaacagaa 64
>41250_csi-MIR399e:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaaa 47
|||||||||||||||||||| ||||||||
Sbjct: 44 gaatggcagggcaattctcctttggcaaa 16
>41248_csi-MIR399c:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaaa 47
|||||||||||||||||||| ||||||||
Sbjct: 135 gaatggcagggcaattctcctttggcaaa 107
>42819_zma-MIR399a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaa 46
|||||||||||||||||||| |||||||
Sbjct: 110 gaatggcagggcaattctcctttggcaa 83
>42596_sbi-MIR399h:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 18 cgaatggcagggcaattctcccttggca 45
||||||||||||||||||||| ||||||
Sbjct: 120 cgaatggcagggcaattctcctttggca 93
>41803_bdi-MIR399b:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaa 46
|||||||||||||||||||| |||||||
Sbjct: 136 gaatggcagggcaattctcctttggcaa 109
>42042_osa-MIR399b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggca 45
|||||||||||||||||||| ||||||
Sbjct: 93 gaatggcagggcaattctcctttggca 67
>41454_ptc-MIR399g:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggca 45
|||||||||||||||||||| ||||||
Sbjct: 91 gaatggcagggcaattctcctttggca 65
>40733_mtr-MIR399c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 20 aatggcagggcaattctcccttggcaaaacagaaa 54
||||||||||||| ||||| |||||||| ||||||
Sbjct: 105 aatggcagggcaaatctcctttggcaaaccagaaa 71
>41150_tcc-MIR399e:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggc 44
|||||||||||||||||||| |||||
Sbjct: 103 gaatggcagggcaattctcctttggc 78
>41063_ghr-MIR399d:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaaaa 48
|||||||||||||| ||||| |||||||||
Sbjct: 93 gaatggcagggcaaatctcctttggcaaaa 64
>40739_mtr-MIR399i:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 20 aatggcagggcaattctcccttggcaaaacagaa 53
||||||||||||| ||||| |||||||| |||||
Sbjct: 90 aatggcagggcaaatctcctttggcaaaccagaa 57
>40738_mtr-MIR399h:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 20 aatggcagggcaattctcccttggcaaaacagaa 53
||||||||||||| ||||| |||||||| |||||
Sbjct: 90 aatggcagggcaaatctcctttggcaaaccagaa 57
>42598_sbi-MIR399j:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 23 ggcagggcaattctcccttggcaa 46
|||||||||||||||| |||||||
Sbjct: 93 ggcagggcaattctcctttggcaa 70
>42589_sbi-MIR399a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 18 cgaatggcagggcaattctcccttggca 45
||||| ||||||||||||||| ||||||
Sbjct: 124 cgaatcgcagggcaattctcctttggca 97
>41151_tcc-MIR399f:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 19 gaatggcagggcaattctcccttggcaaaacagaaatatg 58
|||||||||||||| ||||| |||||||| |||| ||||
Sbjct: 97 gaatggcagggcaaatctcctctggcaaaatagaactatg 58
