miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 297 bits (150), Expect = 2e-81
Identities = 176/187 (94%)
Strand = Plus / Plus
Query: 12 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 60
Query: 72 tgagctatgaatcccacagccctatcaccatctgttattttgacgggcctgcggcttgca 131
|||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 61 tgagctatgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgca 120
Query: 132 tatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaaa 191
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 121 tatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaaa 180
Query: 192 cctttga 198
|||||||
Sbjct: 181 cctttga 187
>40338_rco-MIR159:mirbase
Length = 180
Score = 107 bits (54), Expect = 3e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagcta 78
||||||||||||||||||||||||||| | || || ||||||||| ||||||||||||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 79 tgaatcccacagccctat 96
|| |||||||||||||||
Sbjct: 61 tggatcccacagccctat 78
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 97.6 bits (49), Expect = 3e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 17 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 76
||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63
Query: 77 tatgaatcccacagccctatc 97
|||| ||||||||||||||||
Sbjct: 64 tatggatcccacagccctatc 84
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 97.6 bits (49), Expect = 3e-21
Identities = 150/183 (81%), Gaps = 6/183 (3%)
Strand = Plus / Plus
Query: 12 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
Query: 72 tgagctatgaatcccacagccctatc-accatctgttattttgacgggcctgcggcttgc 130
| ||||||| |||| |||| |||||| | || ||| || || ||||||||||
Sbjct: 61 taagctatggatcc-acagtcctatctatcaactgaag----gataggtttgcggcttgc 115
Query: 131 atatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaa 190
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 116 atatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaa 175
Query: 191 acc 193
|||
Sbjct: 176 acc 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 89.7 bits (45), Expect = 8e-19
Identities = 149/183 (81%), Gaps = 6/183 (3%)
Strand = Plus / Plus
Query: 12 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
Query: 72 tgagctatgaatcccacagccctatc-accatctgttattttgacgggcctgcggcttgc 130
| ||||||| |||| |||| |||||| | || | | || || ||||||||||
Sbjct: 61 taagctatggatcc-acagtcctatctatcaaccgaag----gataggtttgcggcttgc 115
Query: 131 atatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaa 190
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 116 atatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaa 175
Query: 191 acc 193
|||
Sbjct: 176 acc 178
>40397_ahy-MIR159:mirbase
Length = 197
Score = 77.8 bits (39), Expect = 3e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 20 agtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctat 79
|||||||||||||||||||||| ||| | || || ||||||||| |||||||| ||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 80 gaatcccacag 90
| |||||||||
Sbjct: 61 ggatcccacag 71
>40432_gma-MIR159a:mirbase
Length = 214
Score = 71.9 bits (36), Expect = 2e-13
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 11 ggattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctg 70
|||||||| ||||||||||||||||||||||| || | || | |||||| || ||||||
Sbjct: 10 ggattatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctg 69
Query: 71 ctgagctatgaatcccacag 90
|| ||||||| |||||||||
Sbjct: 70 cttagctatggatcccacag 89
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aatcccacag 90
|||||||||
Sbjct: 61 gatcccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aatcccacag 90
|||||||||
Sbjct: 61 gatcccacag 70
>41218_csi-MIR159:mirbase
Length = 216
Score = 63.9 bits (32), Expect = 5e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagc 76
|||||||||||||||||||||||| ||| | || || ||||| || ||||||||||||
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 77 tatgaatcccacagccctat 96
|||| ||||||||| |||||
Sbjct: 68 tatggatcccacagtcctat 87
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 127 ttgcatatctcaggagcttta 147
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaa 41
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 124 ggcttgcatatctcaggagcttta 147
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
