miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 91.7 bits (46), Expect = 1e-19
Identities = 71/77 (92%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtcgacccgccgggccggg- 89
||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 3 tttattaaacccgaaccggtccagccaccgggt--cccgggtcgacccgccgggccgggc 60
Query: 90 cgggtttaataactatg 106
|||||||||||||||||
Sbjct: 61 cgggtttaataactatg 77
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 75.8 bits (38), Expect = 7e-15
Identities = 45/46 (97%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataactatggtcc 110
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 32 accgggtcgacccgccgggccgggccgggtttaataactatggtcc 77
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 67.9 bits (34), Expect = 2e-12
Identities = 72/84 (85%), Gaps = 8/84 (9%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgg-------gtcgacccgccgg 83
||||||||||||| ||||||| ||| ||||||| |||||| |||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgg 68
Query: 84 gccggg-cgggtttaataactatg 106
|||||| |||||||||||||||||
Sbjct: 69 gccgggccgggtttaataactatg 92
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 67.9 bits (34), Expect = 2e-12
Identities = 79/93 (84%), Gaps = 7/93 (7%)
Strand = Plus / Plus
Query: 23 agccggtctttattaaacccgaaccggtctagctaccgggttga------ccgggtcgac 76
||||||||||||||||||||| ||||||| ||| ||||||| || ||||||||||
Sbjct: 1 agccggtctttattaaacccggaccggtccagccaccgggtcgaccggtcccgggtcgac 60
Query: 77 ccgccgggccggg-cgggtttaataactatggt 108
||||||| | ||| |||||||||||||| ||||
Sbjct: 61 ccgccggcctgggccgggtttaataactgtggt 93
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 72/84 (85%), Gaps = 8/84 (9%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttga-------ccgggtcgacccgccgg 83
||||||||||||| ||||||| ||| ||||||| || |||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgatcgggtcccgggtcgacccgccgg 68
Query: 84 gccggg-cgggtttaataactatg 106
|||||| |||||||||||||||||
Sbjct: 69 gccgggtcgggtttaataactatg 92
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtc 73
||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 82 tttattaaacccggaccggtccagccaccgggttgaccgggtc 40
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 61.9 bits (31), Expect = 1e-10
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 20 cacagccggtcttt-attaaacccgaaccggtctagctaccgggttgaccgggtc 73
|||||||||||||| |||||||||| ||||||| ||| ||||||| |||||||||
Sbjct: 92 cacagccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtc 38
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 60.0 bits (30), Expect = 4e-10
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtcgacccgccgggccgg-g 89
||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 3 tttattaaacccggaccggtctagccaccgggt--cttgggtcgacccgccgggccggac 60
Query: 90 cgggtttaataac 102
|||||||||||||
Sbjct: 61 cgggtttaataac 73
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggt 72
||||||||||||| ||||||||||||||||| | ||||||||
Sbjct: 3 tttattaaacccggaccggtctagctaccggatcgaccgggt 44
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 58.0 bits (29), Expect = 2e-09
Identities = 67/79 (84%), Gaps = 8/79 (10%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgg-------gtcgacccgccgg 83
||||||||||||| ||||||| ||| ||||||| |||||| |||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgg 65
Query: 84 gccggg-cgggtttaataa 101
|||||| ||||||||||||
Sbjct: 66 gccgggccgggtttaataa 84
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataac 102
||||||||||||||||||||||| |||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataac 85
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataa 101
|||||||||||||||||||||||| ||||||||||||
Sbjct: 26 accgggtcgacccgccgggccgggccgggtttaataa 62
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataac 102
||||||||||||||||||||||| |||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataac 85
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 58.0 bits (29), Expect = 2e-09
Identities = 63/73 (86%), Gaps = 6/73 (8%)
Strand = Plus / Minus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtcgacccgccgggccggg- 89
||||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 70 tttattaaacccggaccggtccagccaccggt-----cgggtcgacccgccgggccgggc 16
Query: 90 cgggtttaataac 102
|||||||||||||
Sbjct: 15 cgggtttaataac 3
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataa 101
|||||||||||||||||||||||| ||||||||||||
Sbjct: 26 accgggtcgacccgccgggccgggccgggtttaataa 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 32 ttattaaacccgaaccggtctagctaccgggttgacc 68
|||||||||||| ||||||| ||| ||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataa 101
|||||||||||||||||||||||| ||||||||||||
Sbjct: 26 accgggtcgacccgccgggccgggccgggtttaataa 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 32 ttattaaacccgaaccggtctagctaccgggttgacc 68
|||||||||||| ||||||| ||| ||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 58.0 bits (29), Expect = 2e-09
Identities = 80/95 (84%), Gaps = 9/95 (9%)
Strand = Plus / Plus
Query: 23 agccggtcttt-attaaacccgaaccggtctagctaccgggttga-------ccgggtcg 74
||||||||||| |||||||||| ||||||| ||| ||||||| || ||||||||
Sbjct: 1 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcg 60
Query: 75 acccgccgggccgg-gcgggtttaataactatggt 108
|||||||||||||| |||||||||||||| ||||
Sbjct: 61 acccgccgggccggaccgggtttaataactgtggt 95
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataac 102
||||||||||||||||||||||| |||||||||||||
Sbjct: 39 ccgggtcgacccgccgggccgggccgggtttaataac 3
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 7e-09
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataa 101
||||||||||||||||||||||| ||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 7e-09
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataa 101
||||||||||||||||||||||| ||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 7e-09
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataa 101
||||||||||||||||||||||| ||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 7e-09
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataa 101
||||||||||||||||||||||| ||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtc 73
||||||||||||| ||||||| ||| ||||||| |||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgaccgggtc 48
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 54.0 bits (27), Expect = 3e-08
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 68 cgggtcgacccgccgggccggg-cgggtttaataa 101
|||||||||||||||||||||| ||||||||||||
Sbjct: 32 cgggtcgacccgccgggccgggccgggtttaataa 66
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtc 73
||||||||||||| ||||||| ||| ||||||| |||||||||
Sbjct: 73 tttattaaacccggaccggtccagccaccgggtcgaccgggtc 31
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 54.0 bits (27), Expect = 3e-08
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtcgacccgccgggccgg 88
|||| |||||||| ||||||| ||| ||||||| ||||||||||||||||||||||
Sbjct: 6 tttagtaaacccggaccggtccagccaccgggtc--ccgggtcgacccgccgggccgg 61
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 3 tttggccgggttgttgccacagccggtcttt-attaaacccgaaccggtctagctaccgg 61
||||| |||| ||||||| |||||| ||||| ||||||||| ||||||| ||| |||||
Sbjct: 37 tttgggcgggctgttgccccagccgatcttttattaaacccagaccggtccagccaccgg 96
Query: 62 gttgacc 68
|||||||
Sbjct: 97 gttgacc 103
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataac 102
|||||||||||||||||||||||| || ||||||||||
Sbjct: 35 accgggtcgacccgccgggccgggccgagtttaataac 72
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgacc 68
||||||||||||| ||||||| ||| ||||||| ||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 52.0 bits (26), Expect = 1e-07
Identities = 63/73 (86%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtcgacccgccgggccgggc 90
||||||||||||| ||||||| ||| ||||||| |||||||| || | ||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggt--cccgggtcggccggtcgggccgggc 63
Query: 91 -gggtttaataac 102
||||||||||||
Sbjct: 64 agggtttaataac 76
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataac 102
|||||||||||||||| ||||||| |||||||||||||
Sbjct: 32 accgggtcgacccgccaggccgggccgggtttaataac 69
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgacc 68
||||||||||||| ||||||| ||| ||||||| ||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgacc 43
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataac 102
||||| |||||||||||||||||| |||||||||||||
Sbjct: 29 accggatcgacccgccgggccgggccgggtttaataac 66
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgg 61
||||||||||||| ||||||||||| |||||
Sbjct: 3 tttattaaacccggaccggtctagccaccgg 33
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataac 102
|||||||||||| ||||||||||| |||||||||||||
Sbjct: 40 accgggtcgacctgccgggccgggccgggtttaataac 3
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 ggtttggccgggttgttgccacagccggtc-tttattaaacccgaaccggtctagctacc 59
|||||| ||||| ||||||| ||||||||| |||| ||||||| ||||||| ||| |||
Sbjct: 42 ggtttgaccgggctgttgccccagccggtcttttaataaacccagaccggtccagccacc 101
Query: 60 gggttgaccgggtc 73
|||| || ||||||
Sbjct: 102 gggtcgatcgggtc 115
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 52.0 bits (26), Expect = 1e-07
Identities = 63/73 (86%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtcgacccgccgggccggg- 89
||||||||||||| ||||||| ||| ||| ||| |||||||||||| || |||||||
Sbjct: 76 tttattaaacccggaccggtccagccaccaggt--cccgggtcgacccaccaggccgggc 19
Query: 90 cgggtttaataac 102
|||||||||||||
Sbjct: 18 cgggtttaataac 6
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 50.1 bits (25), Expect = 4e-07
Identities = 63/75 (84%), Gaps = 8/75 (10%)
Strand = Plus / Plus
Query: 35 ttaaacccgaaccggtctagctaccgggttgaccgggtc-------gacccgccgggccg 87
||||||||| ||||||| ||| ||||||| ||||||||| ||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggttgacccgccgggccg 63
Query: 88 gg-cgggtttaataa 101
|| ||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 32 ttattaaacccgaaccggtctagctaccgggttgacc 68
|||||||||||| ||||||| ||||||||||| ||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgacc 42
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataa 101
||||||||||||||||||| ||| ||||||||||||
Sbjct: 43 ccgggtcgacccgccgggctgggccgggtttaataa 78
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgg 70
||||||||||||| ||||||| ||| ||||||| ||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg 48
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccgg-gcgggtttaataa 101
|||||||||||||||||||||| ||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccggaccgggtttaataa 78
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccgggc 90
||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggc 66
>52238_ptc-miRf10416-akr:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 ggtcgacccgccgggccgggcggg 93
||||||||||||||||||||||||
Sbjct: 25 ggtcgacccgccgggccgggcggg 2
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 6e-06
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 23 agccggtcttt-attaaacccgaaccggtctagctaccgggttgacc 68
||||||||||| |||||||||| ||||||| ||| ||||||| ||||
Sbjct: 79 agccggtcttttattaaacccggaccggtccagccaccgggtcgacc 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataac 102
|||||||||||| || |||||||| |||||||||||||
Sbjct: 44 accgggtcgacctgctgggccgggccgggtttaataac 7
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtc 73
||||||||||||| ||||||| ||| || |||| |||||||||
Sbjct: 9 tttattaaacccggaccggtccagccactgggtcgaccgggtc 51
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgaccgggtc 73
||||||||||||| ||||||| ||| ||||| | |||||||||
Sbjct: 3 tttattaaacccggaccggtccagccaccggatcgaccgggtc 45
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 66 accgggtcgacccgccgggccgg 88
|||||||||||||||||||||||
Sbjct: 26 accgggtcgacccgccgggccgg 4
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggttgacc 68
||||||||||||| ||||||| ||| ||||||| ||||
Sbjct: 7 tttattaaacccggaccggtccagccaccgggtcgacc 44
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataac 102
|||||||||||||||||| ||||| || ||||||||||
Sbjct: 33 accgggtcgacccgccggaccgggccgagtttaataac 70
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccgg 88
||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgg 70
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccgg 88
||||||||||||||||||||||
Sbjct: 106 ccgggtcgacccgccgggccgg 127
>53762_ptc-miRf11940-akr:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 58 ccgggttgaccgggtcgacccgccgggcc 86
|||||| | ||||||||||||||||||||
Sbjct: 85 ccgggtcggccgggtcgacccgccgggcc 113
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggcc-gggcgggtttaataac 102
|||||||||||||||||||| | |||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccagaccgggtttaataac 85
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataa 101
||||||||||| ||||||||||| ||||||||||||
Sbjct: 40 accgggtcgacttgccgggccgggccgggtttaataa 4
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 31 tttattaaacccgaaccggtctagctaccgggt 63
||||||||||||| ||||||| ||| |||||||
Sbjct: 66 tttattaaacccggaccggtccagccaccgggt 34
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 31 tttattaaacccgaaccggtctagctaccgggt 63
||||||||||||| ||||||| ||| |||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggt 38
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 66 accgggtcgacccgccgggccggg-cgggtttaataa 101
|||||||| ||| ||||||||||| ||||||||||||
Sbjct: 26 accgggtcaacctgccgggccgggccgggtttaataa 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 32 ttattaaacccgaaccggtctagctaccgggt 63
|||||||||||| ||||||| ||| |||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggt 32
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 67 ccgggtcgacccgccgggccggg-cgggtttaataa 101
|||||||||||||| ||| |||| ||||||||||||
Sbjct: 49 ccgggtcgacccgctgggtcgggccgggtttaataa 84
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 71 gtcgacccgccgggccgg-gcgggtttaataa 101
|||||||||||||||||| ||||||||||||
Sbjct: 32 gtcgacccgccgggccggtccgggtttaataa 1
>52345_ptc-miRf10523-akr:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 37 aaacccgaaccggtctagctaccgggtt 64
||||||||| ||||| ||||||||||||
Sbjct: 76 aaacccgaatcggtccagctaccgggtt 103
