miRNEST 2.0, an integrative microRNA resource :: BLAST
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 254 bits (128), Expect = 2e-68
Identities = 134/136 (98%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggc 64
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 65 taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 120
Query: 125 tcaactgaatcggaga 140
||||||||||||||||
Sbjct: 121 tcaactgaatcggaga 136
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggc 64
||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 65 t 65
|
Sbjct: 61 t 61
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 105 gaattggatcccgccttgcatcaactgaatcggag 139
|||||||||||||||||||||||||||||||||||
Sbjct: 125 gaattggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 105 gaattggatcccgccttgcatcaactgaatcggagaccg 143
|||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gaattggatcccgccttgcatcaactgaatcggagaccg 172
>41210_ccl-MIR168:mirbase
Length = 176
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 46
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 105 gaattggatcccgccttgcatcaactgaatcggagaccg 143
|||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gaattggatcccgccttgcatcaactgaatcggagaccg 171
>41101_tcc-MIR168:mirbase
Length = 167
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 105 gaattggatcccgccttgcatcaactgaatcggagaccgcg 145
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaattggatcccgccttgcatcaactgaatcggagaccgcg 158
>40448_gma-MIR168:mirbase
Length = 125
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 105 gaattggatcccgccttgcatcaactgaatcggagaccgcg 145
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 79 gaattggatcccgccttgcatcaactgaatcggaggccgcg 119
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>40355_rco-MIR168:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 99 gaaagagaattggatcccgccttgcatcaactgaatcg 136
||||| ||||||||||||||||||||||||||||||||
Sbjct: 91 gaaagtgaattggatcccgccttgcatcaactgaatcg 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 ctaattcgcttggtgcaggtcgggaactgatt 41
||||||||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactgatt 32
>40044_ath-MIR168b:mirbase
Length = 124
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 41
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
>39833_aly-MIR168b:mirbase
Length = 176
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 41
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaactgatt 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 111 gatcccgccttgcatcaactgaatcggag 139
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>41596_vvi-MIR168:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 111 gatcccgccttgcatcaactgaatcggagac 141
|||||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 107 attggatcccgccttgcatcaactgaatcgga 138
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 107 attggatcccgccttgcatcaactgaatcgga 138
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>40271_bna-MIR168:mirbase
Length = 133
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 41
|||||| |||| | |||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 ggatcccgccttgcatcaactgaatcggag 139
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
