miRNEST 2.0, an integrative microRNA resource :: BLAST
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 97.6 bits (49), Expect = 3e-21
Identities = 76/81 (93%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 5 ggtctctgattcgcttggtgcagcgtcgggaactgattcggcgatttgattgcgcacgct 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | |
Sbjct: 1 ggtctctgattcgcttggtgcag-gtcgggaactgattcggcgatttgattgc-ca-gat 57
Query: 65 ggctggacatgactggttgtt 85
|||| ||||||||||||||||
Sbjct: 58 ggctcgacatgactggttgtt 78
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 126 tagcgaattggatcccgccttgcatcaactgaatcggagg 165
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagcgaattggatcccgccttgcatcaactgaatcggagg 160
>40448_gma-MIR168:mirbase
Length = 125
Score = 83.8 bits (42), Expect = 4e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 129 cgaattggatcccgccttgcatcaactgaatcggaggccgcg 170
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcggaggccgcg 119
Score = 46.1 bits (23), Expect = 9e-06
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 3 gcggtctctgattcgcttggtgcagcgtcgggaac 37
||||||||| ||||||||||||||| |||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcag-gtcgggaac 40
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 81.8 bits (41), Expect = 2e-16
Identities = 51/53 (96%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 5 ggtctctgattcgcttggtgcagcgtcgggaactgattcggcgatttgattgc 57
||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcag-gtcgggaactgattcggcgatttgattgc 52
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 130 gaattggatcccgccttgcatcaactgaatcggag 164
|||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135
>41101_tcc-MIR168:mirbase
Length = 167
Score = 75.8 bits (38), Expect = 1e-14
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 129 cgaattggatcccgccttgcatcaactgaatcggaggccgcg 170
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcg 158
Score = 60.0 bits (30), Expect = 6e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 cggcggtctctgattcgcttggtgcagcgtcgggaactgatt 42
||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcag-gtcgggaactgatt 47
>41215_crt-MIR168:mirbase
Length = 201
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 128 gcgaattggatcccgccttgcatcaactgaatcggag 164
|||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggag 168
Score = 60.0 bits (30), Expect = 6e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 cggcggtctctgattcgcttggtgcagcgtcgggaactgatt 42
||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcag-gtcgggaactgatt 47
>41210_ccl-MIR168:mirbase
Length = 176
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 128 gcgaattggatcccgccttgcatcaactgaatcggag 164
|||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggag 167
Score = 60.0 bits (30), Expect = 6e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 cggcggtctctgattcgcttggtgcagcgtcgggaactgatt 42
||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcag-gtcgggaactgatt 46
>40355_rco-MIR168:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 130 gaattggatcccgccttgcatcaactgaatcg 161
||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcg 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcagcgtcgggaactgatt 42
||||||||||||||| ||||||||||||||
Sbjct: 4 attcgcttggtgcag-gtcgggaactgatt 32
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 132 attggatcccgccttgcatcaactgaatcgga 163
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 132 attggatcccgccttgcatcaactgaatcgga 163
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
>40044_ath-MIR168b:mirbase
Length = 124
Score = 60.0 bits (30), Expect = 6e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 cggcggtctctgattcgcttggtgcagcgtcgggaactgatt 42
|||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcag-gtcgggaactgatt 45
>39833_aly-MIR168b:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 6e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 cggcggtctctgattcgcttggtgcagcgtcgggaactgatt 42
|||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcag-gtcgggaactgatt 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 136 gatcccgccttgcatcaactgaatcggag 164
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>41596_vvi-MIR168:mirbase
Length = 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 136 gatcccgccttgcatcaactgaatcggag 164
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 5 ggtctctgattcgcttggtgcagcgtcgggaac 37
||||||| ||||||||||||||| |||||||||
Sbjct: 1 ggtctctaattcgcttggtgcag-gtcgggaac 32
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>40271_bna-MIR168:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 1 cggcggtctctgattcgcttggtgcagcgtcgggaactgatt 42
|||||| |||||| ||||||||||||| ||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcag-gtcgggaactgatt 44
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 135 ggatcccgccttgcatcaactgaatcggag 164
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
