miRNEST 2.0, an integrative microRNA resource :: BLAST
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 230 bits (116), Expect = 3e-61
Identities = 128/132 (96%)
Strand = Plus / Plus
Query: 22 ctttgtattcttccacagctttcttgaactgcacctattagatttatgttgatgttgttg 81
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaactgcacctattagattaatgttgatgttgttg 60
Query: 82 tgcgatatgccatgaccatatgacattgtattcatttttgctgcggatcaataaaactgg 141
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 61 tgcgatatgccatgaccatatgacattgtattcatttttgctgcggttcaataaagctgt 120
Query: 142 gggaagatacaa 153
||||||||||||
Sbjct: 121 gggaagatacaa 132
>39877_aly-MIR396a:mirbase
Length = 172
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 14 gtgaccctctttgtattcttccacagctttcttgaactgca 54
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6 gtgaccctctctgtattcttccacagctttcttgaactgca 46
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 18 ccctctttgtattcttccacagctttcttgaactgc 53
||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccctctttgtattcttccacagctttcttgaactgc 42
>40646_lja-MIR396:mirbase
Length = 108
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 19 cctctttgtattcttccacagctttcttgaactgca 54
||||||||||||||||||||||||||||||||||||
Sbjct: 3 cctctttgtattcttccacagctttcttgaactgca 38
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 26 gtattcttccacagctttcttgaactgcacctatt 60
|||||||||||||||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgcacctatt 39
>40473_gma-MIR396a:mirbase
Length = 140
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 20 ctctttgtattcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaactgca 43
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 22 ctttgtattcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaactgca 33
>41242_csi-MIR396b:mirbase
Length = 134
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 19 cctctttgtattcttccacagctttcttgaactgca 54
|||||||||||| |||||||||||||||||||||||
Sbjct: 7 cctctttgtatttttccacagctttcttgaactgca 42
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 118 tttgctgcggatcaataaaactgggggaagatacaaacagg 158
|||| ||||| |||||||| ||| |||||||||||||||||
Sbjct: 78 tttgttgcggttcaataaagctgtgggaagatacaaacagg 118
>40085_ath-MIR396a:mirbase
Length = 151
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 25 tgtattcttccacagctttcttgaactgca 54
||||||||||||||||||||||||||||||
Sbjct: 4 tgtattcttccacagctttcttgaactgca 33
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 26 gtattcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 123 tgcggatcaataaaactgggggaagatacaaac 155
||||| |||||||| ||| ||||||||||||||
Sbjct: 103 tgcggttcaataaagctgtgggaagatacaaac 135
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 26 gtattcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 123 tgcggatcaataaaactgggggaagatacaaaca 156
||||| |||||||| ||| |||||||||||||||
Sbjct: 103 tgcggttcaataaagctgtgggaagatacaaaca 136
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 27 tattcttccacagctttcttgaactgca 54
||||||||||||||||||||||||||||
Sbjct: 1 tattcttccacagctttcttgaactgca 28
>42814_zma-MIR396h:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 21 tctttgtattcttccacagctttcttgaactgca 54
||||||| |||||||||||||||||||||||||
Sbjct: 109 tctttgtgatcttccacagctttcttgaactgca 76
>42808_zma-MIR396b:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 tctttgtattcttccacagctttcttgaactgca 54
||||||| |||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgca 43
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 tctttgtattcttccacagctttcttgaactgca 54
||||||| |||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgca 43
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaactgcacct 57
|||||||||| |||||||||||||
Sbjct: 107 ccacagctttattgaactgcacct 84
>42461_sof-MIR396:mirbase
Length = 134
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 tctttgtattcttccacagctttcttgaactgca 54
||||||| |||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgca 43
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaactgcacct 57
|||||||||| |||||||||||||
Sbjct: 113 ccacagctttattgaactgcacct 90
>42026_osa-MIR396a:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactgcac 55
||||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgcac 34
>41241_csi-MIR396a:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 19 cctctttgtattcttccacagctttcttgaactg 52
||||||||| |||||||||||||||||||||||
Sbjct: 8 cctctttgtgatcttccacagctttcttgaactg 41
>42813_zma-MIR396g:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 30 tcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||
Sbjct: 113 tcttccacagctttcttgaactgca 89
>42807_zma-MIR396a:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgca 43
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgca 43
>42027_osa-MIR396b:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactgca 54
|||||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgca 55
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactgc 53
||||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgc 54
>42472_ssp-MIR396:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactgca 54
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaactgcacct 57
|||||||||| |||||||||||||
Sbjct: 93 ccacagctttattgaactgcacct 70
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactg 52
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactgca 54
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>40477_gma-MIR396e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaactg 52
|||||||||||||||||||||||
Sbjct: 5 tcttccacagctttcttgaactg 27
>39379_pab-MIR396a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tcttccacagctttcttgaact 51
||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaact 35
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactg 52
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>39878_aly-MIR396b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 27 tattcttccacagctttcttgaact 51
|||| ||||||||||||||||||||
Sbjct: 27 tatttttccacagctttcttgaact 51
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40086_ath-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
