miRNEST 2.0, an integrative microRNA resource :: BLAST
>41510_ptc-MIR530b:mirbase
Length = 172
Score = 276 bits (139), Expect = 6e-75
Identities = 172/186 (92%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 8 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 60
Query: 68 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatagagtg 127
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaa-------------- 106
Query: 128 ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccat 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccat 166
Query: 188 tttggt 193
||||||
Sbjct: 167 tttggt 172
>41509_ptc-MIR530a:mirbase
Length = 144
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 8 gccaatatgttgcctttatctgcatttgcacctgca 43
||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgca 36
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 154 ttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 193
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
>41263_csi-MIR530b:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 cctttatctgcatttgcacctgcatctt 47
||||||||||||||||||||||||||||
Sbjct: 3 cctttatctgcatttgcacctgcatctt 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 157 aggtgcaggtgcaagtgcaggtgaatgcc 185
|||||||| ||||||||||| ||||||||
Sbjct: 126 aggtgcagttgcaagtgcagatgaatgcc 154
>41158_tcc-MIR530b:mirbase
Length = 178
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 atgttgcctttatctgcatttgcacctgca 43
|||| |||||||||||||||||||||||||
Sbjct: 7 atgtagcctttatctgcatttgcacctgca 36
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 156 gaggtgcaggtgcaagtgcaggtgaatgccattttgg 192
|||||||||| ||| |||||||||||||||||||||
Sbjct: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
>41157_tcc-MIR530a:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tttatctgcatttgcacctgca 43
||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36
>41205_aqc-MIR530:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tctgcatttgcacctgcatct 46
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
