miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46205_miR157:micropc
Length = 84
Score = 167 bits (84), Expect = 3e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggg 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggg 60
Query: 92 agtgtgctctctcttcttctgtca 115
||||||||||||||||||||||||
Sbjct: 61 agtgtgctctctcttcttctgtca 84
>45433_miR156:micropc
Length = 83
Score = 165 bits (83), Expect = 1e-41
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 60
Query: 93 gtgtgctctctcttcttctgtca 115
|||||||||||||||||||||||
Sbjct: 61 gtgtgctctctcttcttctgtca 83
>45453_miR156:micropc
Length = 77
Score = 153 bits (77), Expect = 4e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 36 cagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttgggagtg 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttgggagtg 60
Query: 96 tgctctctcttcttctg 112
|||||||||||||||||
Sbjct: 61 tgctctctcttcttctg 77
>46600_miR156:micropc
Length = 81
Score = 58.0 bits (29), Expect = 2e-09
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 34 gacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttgggag 93
||||||||| ||||||||||||||| | |||| |||| |||| ||| |||||||||
Sbjct: 1 gacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttgggag 60
Query: 94 tgtgctctctcttcttctgtc 114
||||| |||||||| ||||||
Sbjct: 61 tgtgccctctcttcctctgtc 81
>45755_miR156:micropc
Length = 77
Score = 50.1 bits (25), Expect = 5e-07
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 36 cagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttgggagtg 95
||||||| ||||||||||||||| | |||| |||| |||| ||| |||||||||||
Sbjct: 1 cagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttgggagtg 60
Query: 96 tgctctctcttcttctg 112
||| |||||||| ||||
Sbjct: 61 tgccctctcttcctctg 77
>46380_miR157:micropc
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcacaacccg 58
||||||||||| |||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacaacccg 27
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtca 115
||||||||||||||||||| ||||||||||
Sbjct: 55 tgttgggagtgtgctctctactcttctgtca 85
>45310_miR157:micropc
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcacaa 54
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagaaagagagcacaa 23
>45257_miR156:micropc
Length = 84
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtca 115
||||||||||||||||||| ||||||||||
Sbjct: 54 tgttgggagtgtgctctctactcttctgtca 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacccg 58
|||||||||| |||||||||||||||
Sbjct: 1 tgacagaagagagagagcacaacccg 26
>44952_miR156:micropc
Length = 84
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtca 115
||||||||||||||||||| ||||||||||
Sbjct: 54 tgttgggagtgtgctctctactcttctgtca 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacccg 58
|||||||||| |||||||||||||||
Sbjct: 1 tgacagaagagagagagcacaacccg 26
>46790_miR156:micropc
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtc 114
||||||||||||||||||| |||||||||
Sbjct: 53 tgttgggagtgtgctctctactcttctgtc 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 34 gacagaagaaagagagcacaacccg 58
||||||||| |||||||||||||||
Sbjct: 1 gacagaagagagagagcacaacccg 25
>45619_miR156:micropc
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaa 54
||||||||||||||||||||||
Sbjct: 1 tgacagaagaaagagagcacaa 22
>45156_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctg 112
||||||||||||||||||| |||||||
Sbjct: 51 tgttgggagtgtgctctctactcttctg 78
