miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LF38|EDL1_ARATH EID1-like F-box protein 1 OS=Arabidopsis
thaliana GN=EDL1 PE=2 SV=1
Length = 293
Score = 88.2 bits (217), Expect = 1e-17
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +3
Query: 3 IQIPGHFVYRTRFSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEE 137
+QIPGHFVYRTRFSRT G+S L PQCRTDVLYV DPCEHLDQGEE
Sbjct: 110 VQIPGHFVYRTRFSRTLGRSLLPPQCRTDVLYVCDPCEHLDQGEE 154
>sp|Q9FLZ8|EDL2_ARATH EID1-like F-box protein 2 OS=Arabidopsis
thaliana GN=EDL2 PE=2 SV=1
Length = 249
Score = 83.6 bits (205), Expect = 4e-16
Identities = 38/46 (82%), Positives = 43/46 (93%), Gaps = 1/46 (2%)
Frame = +3
Query: 3 IQIPGHFVYRTRFSRTSGKSFLLPQCRT-DVLYVSDPCEHLDQGEE 137
+QI GHFV+RTRFSRTSG+SFL PQCRT D+LYVSDPCEHLDQGE+
Sbjct: 109 VQISGHFVHRTRFSRTSGRSFLPPQCRTDDILYVSDPCEHLDQGED 154
>sp|Q93ZT5|EDL3_ARATH EID1-like F-box protein 3 OS=Arabidopsis
thaliana GN=EDL3 PE=2 SV=1
Length = 272
Score = 53.9 bits (128), Expect = 3e-07
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 15 GHFVYRTRFSRTSGKSFLLPQCRTDVLYVSDPCEH 119
GHF +RFS+TSG+ FL CR D+LY+SDPCEH
Sbjct: 128 GHFACESRFSKTSGRFFLPKNCRRDLLYMSDPCEH 162
