miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 61 tgttgtggctctactcatgcactgcctcttccctggct 98
|||| ||||||||| |||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggct 97
>41683_vvi-MIR408:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 58 agctgttgtggctctactcatgcactgcctcttccctggct 98
||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 58 agctgtttttgctctacccatgcactgcctcttccctggct 98
>40391_rco-MIR408:mirbase
Length = 92
Score = 56.0 bits (28), Expect = 5e-09
Identities = 75/90 (83%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 9 aagacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtgg 68
||||| ||||||||| || |||||||||| | | | ||||||||| | ||||| |||
Sbjct: 2 aagactgggaacaggcagtgcatggatggggctactaacagaaaac---atctgttttgg 58
Query: 69 ctctactcatgcactgcctcttccctggct 98
|||||| | |||||||||||||||||||||
Sbjct: 59 ctctacccctgcactgcctcttccctggct 88
>40108_ath-MIR408:mirbase
Length = 218
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 60 ctgttgtggctctactcatgcactgcctcttccctggct 98
||||| || |||||| |||||||||||||||||||||||
Sbjct: 103 ctgttttgtctctacccatgcactgcctcttccctggct 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 10 agacagggaacaggtagagcatggatggagtt 41
|||||||||||| | ||||||||||| |||||
Sbjct: 51 agacagggaacaagcagagcatggattgagtt 82
>39897_aly-MIR408:mirbase
Length = 211
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 60 ctgttgtggctctactcatgcactgcctcttccctggct 98
||||| || |||||| |||||||||||||||||||||||
Sbjct: 100 ctgttttgtctctacccatgcactgcctcttccctggct 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 10 agacagggaacaggtagagcatggatggagtt 41
|||||||||||| | ||||||||||| |||||
Sbjct: 48 agacagggaacaagcagagcatggattgagtt 79
>40405_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 ctcatgcactgcctcttccctggct 98
|||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggct 102
>40404_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 ctcatgcactgcctcttccctggct 98
|||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggct 102
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 ctcatgcactgcctcttccctggct 98
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>39742_smo-MIR408:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 atgcactgcctcttccctggctgc 100
||||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggctgc 99
>41252_csi-MIR408:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 76 catgcactgcctcttccctggct 98
|||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggct 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 aagacagggaacaggtagagcatggatgga 38
||||| ||||||||| ||||||||||||||
Sbjct: 57 aagacggggaacaggcagagcatggatgga 86
>41193_aqc-MIR408:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 76 catgcactgcctcttccctggct 98
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 77 atgcactgcctcttccctggct 98
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggct 179
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42465_sof-MIR408d:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggct 197
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tgcactgcctcttccctggct 98
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
