miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42655_tae-MIR1122:mirbase
          Length = 295

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 17  ccctccgttcctaaatataagaccttttagagattacactgtagattacaaacggagcaa 76
           ||||| ||||||||||||| | | | ||||||||| |||| | || |||| ||| || ||
Sbjct: 288 ccctctgttcctaaatatatgccttcttagagattccactatggactacatacgaagtaa 229

                                                     
Query: 77  aataagtgaatctacactataaagtatgtctatatacatccg 118
           ||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 228 aatgagtgaatctacactctaaaatatgtctatatacatccg 187



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 120 cgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagaggg 173
           |||||||||||||||||| ||| ||||| | |   |||||||||||||||||||
Sbjct: 235 cgtatgtagtccatagtggaatctctaagaaggcatatatttaggaacagaggg 288



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 157 tatttaggaacagagggagta 177
           |||||||||||||||||||||
Sbjct: 26  tatttaggaacagagggagta 6




>42659_tae-MIR1126:mirbase
          Length = 164

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                      
Query: 13 tactccctccgttcctaaatataagaccttttagagattacactgtagattacaaacgga 72
          ||||| ||||||||||||||||||| | || |||| ||| |||| | || |||| |||||
Sbjct: 2  tactctctccgttcctaaatataagtctttatagaaattccactatggactacatacgga 61

                                     
Query: 73 gcaaaataagtgaatctacactataaa 99
          ||||||||| |||||||||||| ||||
Sbjct: 62 gcaaaataaatgaatctacactctaaa 88



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 119 ccgtatgtagtccatagtgaaatatctaaaaggttttatatttaggaacagagggagta 177
           ||||||||||||||||||| ||| |||| || |  |||||||||||||| ||| |||||
Sbjct: 60  ccgtatgtagtccatagtggaatttctataaagacttatatttaggaacggagagagta 2



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 13  tactccctccgttcctaaatataagaccttttagagatt 51
           ||||||||||||| ||||||||||| | || ||||||||
Sbjct: 163 tactccctccgtttctaaatataagtctttgtagagatt 125




>41899_hvu-MIR5049:mirbase
          Length = 83

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 tatttaggaacagagggagt 176
           ||||||||||||||||||||
Sbjct: 20  tatttaggaacagagggagt 1