miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150,
chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1
SV=1
Length = 164
Score = 83.6 bits (205), Expect = 4e-16
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = -2
Query: 187 VVALWLTTVVVGAINSXXXXXXXXXXXXXGYTGWFVYRYLLFKESRKELATDIESLKKKI 8
+VA+WL+++VVGAINS GYTGWFVYRYLLFK SRKELA DIESLKKKI
Sbjct: 101 IVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKI 160
Query: 7 AG 2
AG
Sbjct: 161 AG 162
>sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa,
chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2
Length = 174
Score = 42.7 bits (99), Expect = 7e-04
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -2
Query: 187 VVALWLTTVVVGAINSXXXXXXXXXXXXXGYTGWFVYRYLLFKESRKELATDIESLKKKI 8
VVALW + ++ AI+ GYTGWF Y+ L+FK R+ L ++S K I
Sbjct: 111 VVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDI 170
Query: 7 AG 2
G
Sbjct: 171 LG 172
